Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05183 and BL03445

See DNA alignment / Visit BSNT_05183 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence pep-align/BSNT_05183___yveR.1.5803.seq
#    -bsequence pep-align/BL03445___yveR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05183___yveR-BL03445___yveR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05183___yveR-BL03445___yveR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05183___yveR
# 2: BL03445___yveR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     190/345 (55.1%)
# Similarity:   248/345 (71.9%)
# Gaps:           3/345 ( 0.9%)
# Score: 989.0
# 
#
#=======================================

BSNT_05183___      1 METSAVSLLVAVYNTETYIRTCLESLRNQTVDNIEIIIVNDGSQDASPDI     50
                     ||..||||||||||||.::..||:||.:||:.|||||||||||.|.|..|
BL03445___yve      1 MENPAVSLLVAVYNTEAFLPNCLQSLISQTLKNIEIIIVNDGSTDGSQKI     50

BSNT_05183___     51 AEEYAKMDNRFKVIHQENQGLGAVRNKGIEAARGEFIAFIDSDDWIEPDY    100
                     .:.||:.|.|.|.|.|:|||||||||||||||.||::|||||||||||||
BL03445___yve     51 IDHYARKDGRIKTIQQDNQGLGAVRNKGIEAASGEYLAFIDSDDWIEPDY    100

BSNT_05183___    101 CEQMLRAAGDE-TDLVICNYAAEFEDTGKTMDSDIAQTYQDQPKEHYIKA    149
                     |:.|...|.|| .|||||:||.|.:||.||:..||.:.|:.:|||.::|.
BL03445___yve    101 CQSMYEKAKDEDADLVICDYAVEIQDTEKTVCPDIGKNYEGKPKEAFMKD    150

BSNT_05183___    150 LFEGKVRGFSWNKLYRRSMIEAHRLSFPLRGELEHVEDQFFSFRAHFFAR    199
                     |.:|||.|||||||||||:||.|:|.||||.|||::|||:||||...:|.
BL03445___yve    151 LLKGKVSGFSWNKLYRRSLIERHKLVFPLRDELENIEDQYFSFRCLLYAN    200

BSNT_05183___    200 SVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYEANAAFLQENNKLEE    249
                     :.::|..||||||:||:||||:||..|||.||||||||...|.::.:|..
BL03445___yve    201 TAAFVTKPLYHYRVHLASIVQKYQAGLFEDGLALYEANLDCLTKHGELPA    250

BSNT_05183___    250 YRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLS    299
                     .::.|..|||.|..|.:|||.|:.......||.:|:..|||.|.|:..:|
BL03445___yve    251 LKEALHVFIVNHGCISILNECKSRNKNPSIEKYKNIRSICACPEFRGKIS    300

BSNT_05183___    300 KTGTAPFDTKRSCLLLMAKYRMIPFVAMASAVYQRVIEYKMRNRG    344
                     ....:.||:|:..||::.:.|::|.|...:|:||::||::|:.  
BL03445___yve    301 AVDMSAFDSKKKLLLMLIRLRLMPAVYGFAAIYQKMIEHRMKK--    343


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