Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05311 and BL03408
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:25
# Commandline: needle
# -asequence pep-align/BSNT_05311___hisD.1.5803.seq
# -bsequence pep-align/BL03408___hisD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05311___hisD-BL03408___hisD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05311___hisD-BL03408___hisD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05311___hisD
# 2: BL03408___hisD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 427
# Identity: 319/427 (74.7%)
# Similarity: 364/427 (85.2%)
# Gaps: 1/427 ( 0.2%)
# Score: 1610.0
#
#
#=======================================
BSNT_05311___ 1 MKIKTISGAERLSLKRSIDAGTEEQRKTVRSIIEDVKANGDQAVRSYTAK 50
||||:|||...:|||||||||||||||.||.|||:||.||:.||.::|.:
BL03408___his 1 MKIKSISGNTSVSLKRSIDAGTEEQRKAVRGIIEEVKKNGNAAVSAFTRQ 50
BSNT_05311___ 51 FDGIEIDSPLVTKEEFEEAYTSLDSRLLQVIRQAIENIREYHERQLQSSW 100
|||.::....|::||.:|||::|:.|.|::|:.||.||:|||||||.:||
BL03408___his 51 FDGADVAGFRVSEEEIKEAYSALEERDLEIIQAAIFNIKEYHERQLATSW 100
BSNT_05311___ 101 FYHRKDGTMLGQKVTALDSAGVYVPGGTAAYPSSVLMNVIPALVAGVERI 150
|||||||||||||:|.|||||||||||||||||||||||||||||||:||
BL03408___his 101 FYHRKDGTMLGQKITPLDSAGVYVPGGTAAYPSSVLMNVIPALVAGVDRI 150
BSNT_05311___ 151 VLVTPPGKDGLLSPGVLVAAAELGIKDIYKMGGAQAIAALAYGTETIEPV 200
||.:||||||.||.|||.||||||:.:||||||||||||||||||||.||
BL03408___his 151 VLASPPGKDGKLSAGVLAAAAELGVTEIYKMGGAQAIAALAYGTETITPV 200
BSNT_05311___ 201 DKITGPGNIYVALAKREVFGDVDIDMIAGPSEIVVLADETAIPSEIAADL 250
||||||||||||||||||||.||||||||||||.:|||.||...||||||
BL03408___his 201 DKITGPGNIYVALAKREVFGQVDIDMIAGPSEIAILADSTANYREIAADL 250
BSNT_05311___ 251 LSQAEHDKLSSCVFVTDSMALAEAVSAEVSKQLKTLPRREIAEASVRDYG 300
|||||||.::|.:.||||..|||:|..||.:||:.|||:|||..|:.:||
BL03408___his 251 LSQAEHDAMASSILVTDSETLAESVLKEVYRQLEHLPRKEIARQSIDNYG 300
BSNT_05311___ 301 CIYVAETMVEAINTVNTLAPEHLEIITQSPEALLGSIKHAGAIFLGRYSP 350
.|||.|||.||::.:|.||||||||:|..|:||||.|||||||||||||.
BL03408___his 301 LIYVTETMNEAVSVINELAPEHLEILTVQPDALLGQIKHAGAIFLGRYSS 350
BSNT_05311___ 351 EPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKKSSIISYSQSAFEEHAE 400
|||||||||||||||||||||||||||||||||:|||||||:.||..:||
BL03408___his 351 EPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKRSSIISYSREAFRANAE 400
BSNT_05311___ 401 SIAAFARLEGLEAHARSIEARERRISK 427
.|||||||||||||||:||:|.|...
BL03408___his 401 KIAAFARLEGLEAHARAIESRNREED- 426
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