Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05323 and BL03405

See DNA alignment / Visit BSNT_05323 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:25
# Commandline: needle
#    -asequence pep-align/BSNT_05323.1.5803.seq
#    -bsequence pep-align/BL03405___yvoF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05323-BL03405___yvoF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05323-BL03405___yvoF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05323
# 2: BL03405___yvoF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:      83/173 (48.0%)
# Similarity:    92/173 (53.2%)
# Gaps:          71/173 (41.0%)
# Score: 446.0
# 
#
#=======================================

BSNT_05323         1 MRKTDRHPVSGANSLWHVYQTVPFLKVVKNFIVIQIARYTPFIGMKNWLY     50
                     ||||.|:||||||||||:||||||.||||||||||.|||||.:|||||:|
BL03405___yvo      1 MRKTKRYPVSGANSLWHIYQTVPFFKVVKNFIVIQAARYTPILGMKNWMY     50

BSNT_05323        51 RTFLRMKVGNQTSFALMVMPDIMFPEKISVGTNTIIGYNTTILAHEYSGS    100
                     |||||||:|.:.|||||||||||||||||||.||:||||||||||||. .
BL03405___yvo     51 RTFLRMKIGEKCSFALMVMPDIMFPEKISVGRNTVIGYNTTILAHEYL-I     99

BSNT_05323       101 AQF-----------------------------------------------    103
                     .::                                               
BL03405___yvo    100 KEYRLGEVIIGDEVMIGANTTILPGVEIGDGAVISAGTLVHKDVPPGAFV    149

BSNT_05323       103 -----------------------    103
                                            
BL03405___yvo    150 GGNPMRLIYTKEEMEKRLETPAE    172


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.