Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_05334 and BL03400

See DNA alignment / Visit BSNT_05334 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_05334___yvnB.1.5803.seq
#    -bsequence pep-align/BL03400___yvnB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05334___yvnB-BL03400___yvnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05334___yvnB-BL03400___yvnB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05334___yvnB
# 2: BL03400___yvnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1362
# Identity:     628/1362 (46.1%)
# Similarity:   878/1362 (64.5%)
# Gaps:         106/1362 ( 7.8%)
# Score: 3238.5
# 
#
#=======================================

BSNT_05334___      1 MRKY------TVIASILLSFLSV----LSGGHHESKAFPVVQQELFQTPH     40
                     |:||      .::|::||..|.:    .||..|.....||::    .|| 
BL03400___yvn      1 MKKYRNRQTLLLLAAVLLFALQIPISSASGEEHIQPGSPVIR----HTP-     45

BSNT_05334___     41 YIPLLENPPQIDVKAEMRSNLMIEAQVRDNSYQAFSA-------FLFYKQ     83
                                          :.:.|..|:.|  |||       .|:|||
BL03400___yvn     46 ---------------------VEQVQKGDDIY--FSAQAAADTVILYYKQ     72

BSNT_05334___     84 SNELGYKMVPMDPTPGAVRKFLAQIPKRLIWNSELEYYIVMSNGKQRVES    133
                     .:||.|:.:||:..||....::|::....|.:.:::|||....|...|::
BL03400___yvn     73 HDELPYRAIPMEVEPGRQNAYIAKLESESIASGKVQYYIEAQVGDSSVKT    122

BSNT_05334___    134 ETKKLKLEGYQADLAHIPELLITELAVDTKNIGRADGYEFIEIFNTTDRT    183
                     :...:.|:|.:.|...:|||||||:.|||.|.|..|||||||::|.|::.
BL03400___yvn    123 DVYTVALKGMRTDTQKLPELLITEMVVDTSNTGGKDGYEFIEVYNNTNKA    172

BSNT_05334___    184 IDFKDYHIRYRYPKEGPDSDLIWRPDER--ILIPSGETFVVWLKPAGHPE    231
                     :....|.|:||:|::|.:||:|| |.|.  :.||||:|.|.|:|...:..
BL03400___yvn    173 VHLNSYKIKYRHPEKGKESDVIW-PFEHDDVAIPSGQTHVFWVKNRSNGH    221

BSNT_05334___    232 LTSEDFNRYYQTQLKEGKNLAVIDETEGMANTRPRAVVISTNTGKDISVA    281
                     ||..||||||...|:|||.|..: :..||.||.||.|:|.||:|::::.|
BL03400___yvn    222 LTESDFNRYYGVHLREGKTLTAL-KGGGMENTAPREVIICTNSGEEVASA    270

BSNT_05334___    282 HYR----KHALRRLSSVLYKYPLNGTAELLNISIGEKNPSPGTVLQAQVP    327
                     .|:    |..:.:..::||:|||:||..:..||.||:.||||::|:.|.|
BL03400___yvn    271 RYQSEPDKTDVAKNKALLYRYPLDGTKHMKIISAGEEKPSPGSLLKTQAP    320

BSNT_05334___    328 EQKRKIKLDKEKPVIEDLTDRKPVRPAESIELRADIRDRSLVKTAAFYYR    377
                     .|...:..|:|||.|.|:||.:.|:|.|:|:|.||::|...||.|.|:||
BL03400___yvn    321 SQTVTVMPDREKPEIHDMTDHQAVKPGETIQLLADMKDNRQVKQAQFFYR    370

BSNT_05334___    378 TDENKPFKRILAEKDRNDNLYHYIVYSPELIGKDQLEYYVAAGDGINEAR    427
                     .::::.|..:..||.|||.||.:.:|..|||||:::|||:.||||.|.:.
BL03400___yvn    371 MNDDERFTEVRVEKSRNDGLYRHNIYFAELIGKEKVEYYMRAGDGSNVSS    420

BSNT_05334___    428 TPVKMIDIKQTSKAHGLRMNIENRDTLSGTQFLKATTEGRADSIKLWIDG    477
                     |..|.|.::|.. ..|||:|:....|:||...||||:|.......:.|||
BL03400___yvn    421 TEKKTIPLEQRI-LKGLRLNVSEGGTVSGKMLLKATSEKPPSETTIRIDG    469

BSNT_05334___    478 KKQVT-EPAMEKEVYFAFDTRKTNLYFKNAVTMEGKVLKVFDDTTNKYRT    526
                     .:|.. |||:||:.|||||..:||||||||||:..:|.|||||:..:|.|
BL03400___yvn    470 IEQKEGEPALEKKAYFAFDVNQTNLYFKNAVTIGRRVQKVFDDSRRRYAT    519

BSNT_05334___    527 YSVPLPETLLRKGKQLQRITIRSGSKVSPFD-TA-ENRDDFLVKNARLVL    574
                     .:||:.....:|||... |.:|||:|.:||: || ||||||::||.||:|
BL03400___yvn    520 ITVPVSPDEFKKGKPFS-IKVRSGTKSTPFEQTAEENRDDFVLKNPRLIL    568

BSNT_05334___    575 SDGTVIRDQRV-SPEKELFIGDNQRSNKSWQFQFNLPDGLFTSQLLEWDT    623
                     :|||:|||:|. .|:.||..||...:::.::|:|.:|:..|.|...:|.|
BL03400___yvn    569 ADGTIIRDERYDDPKAELPAGDGPGAHEWYEFRFTIPEAKFASLASQWHT    618

BSNT_05334___    624 SKLSEGAHHIQASDGKENVSLVVRVDNSGPHIEPNITEGQTYKGNLILQA    673
                     ...:||.|.::|.:|:|.:...|.|||:||.|:.::.:|:||||:..:.|
BL03400___yvn    619 RAWNEGQHIVEAENGEERLIRRVTVDNTGPEIKTSLKDGRTYKGSFEINA    668

BSNT_05334___    674 DMYDKWSKIEEAEASLDGESITLPYHTSSSDLLPGKHSLKVTATDLAGNK    723
                     ..:||||.::..:|.|||:.|.|||..||:.|..|||.||:.|.|.|||.
BL03400___yvn    669 AAHDKWSGMKSIKAFLDGKKIALPYLVSSARLDAGKHELKIKAEDSAGNL    718

BSNT_05334___    724 TVIERIFKTEREHPDQP-EVIDSEADTHKAKLSVRVKDPTNDAMDVGFYR    772
                     :::::.|..:.|.||:| .|.::...|| |||:|||||||.|.|.|.|::
BL03400___yvn    719 SIVKKAFYIKEEKPDKPARVKNTPGSTH-AKLAVRVKDPTKDKMKVSFHQ    767

BSNT_05334___    773 GFQYTARN--HVKIFKHASLTEPPKSFVPERETPFTNKELERVSAADGKT    820
                     |||||.::  ||.:..:.|.||||:||....|...|.:|...:||.|||.
BL03400___yvn    768 GFQYTVKDEEHVDVSANESGTEPPQSFAVRGEKALTKEERSGMSALDGKG    817

BSNT_05334___    821 VSTENKELFPYHRFEVTVDPSIDENDLAEAVWKGSSLPGRKVTMYAWNYR    870
                     ..|.:...||||||:|.||.:...||..|.:|:|||||||||:|:|||:.
BL03400___yvn    818 FETSSTTKFPYHRFDVKVDENTGPNDKVEVLWRGSSLPGRKVSMFAWNWA    867

BSNT_05334___    871 TNEWQPVDSFVAKDDKPFTLKASVIAADFVRESKMNVIVQDEIPPAKDMY    920
                     :..|:.:...||||.||||||.|:.|||::|:||.::|:||:|..:::.|
BL03400___yvn    868 SKRWETLAFHVAKDGKPFTLKGSIKAADYIRQSKASIIIQDQIQLSQNDY    917

BSNT_05334___    921 TFVWMSDTQYYAESYPHIFDKQTEWIKDNQKQLNIKYVFHTGDIVDDSAD    970
                     |||||||||||:|||||||::|.:||.:.:.:|||:|||||||:||::..
BL03400___yvn    918 TFVWMSDTQYYSESYPHIFERQVKWIAEQKDKLNIQYVFHTGDLVDEADQ    967

BSNT_05334___    971 IRQWKNADRSMSVLDKSGIPYGVLAGNHDVGHKDGSYRVFGKYFGSDRFD   1020
                     ..|||.||:.|.|||.:.:|||||||||||.|||.||..||:|||..||.
BL03400___yvn    968 PLQWKRADQFMKVLDDNQVPYGVLAGNHDVSHKDRSYLKFGRYFGERRFK   1017

BSNT_05334___   1021 KKLHYGGSYKNNRGHYDLISSNGNDYIMLYMGWGITDEDIAWMNQVLKKH   1070
                     :|.||||||:||:||||||||.||||||:.|||||..:::.|::.|||:|
BL03400___yvn   1018 QKPHYGGSYQNNKGHYDLISSGGNDYIMVSMGWGIGKKELQWIDDVLKRH   1067

BSNT_05334___   1071 PDRMAILAFHEYLLVSGNRSPIGEKIFKEIVKPNPNVVMVLSGHYHSAMR   1120
                     |||.|||||||:|||||:|||||||||::|:|.||||:.||||||||:..
BL03400___yvn   1068 PDRKAILAFHEFLLVSGSRSPIGEKIFEQIIKRNPNVIAVLSGHYHSSNL   1117

BSNT_05334___   1121 KTDELDDDGDGKPDRLVHQMLADYQGGPEGGQGYLRLLQFDQANDMVHVS   1170
                     |.|:|||:|||||||.|:||||||||||||||||||:|..|..:|.:||.
BL03400___yvn   1118 KVDKLDDNGDGKPDRKVYQMLADYQGGPEGGQGYLRILHVDPKHDTIHVK   1167

BSNT_05334___   1171 TYSPYVKDKNYYDTDTYGNKDEFSLSLDLKPRIKKVETDYFECNVYTNEE   1220
                     |||||:.|.|:||...:|.||||::..|||||.|||:|||||.||::|:|
BL03400___yvn   1168 TYSPYLDDYNFYDPHQFGPKDEFNIKTDLKPRKKKVKTDYFELNVFSNKE   1217

BSNT_05334___   1221 LGKREQVKSGDTAEFRWDHLEPQSVYYWYIIVEDSFNGKTKSPIWKFKTK   1270
                     :||.:.||||.||...|..|:|.:.|:||....|.:.|.::|.:|:..||
BL03400___yvn   1218 IGKAKTVKSGKTASVTWKDLQPNTTYFWYAAASDQYGGNSRSQMWRLTTK   1267

BSNT_05334___   1271 KETYR------PAPDQFDFRHVSNP-------------------------   1289
                     .:..:      .|......|.:|..                         
BL03400___yvn   1268 DDGMKSFLIDQTAGAGSALRQLSGSPPPAGMILKKGTNLPIAEISLWLAA   1317

BSNT_05334___   1289 ------------   1289
                                 
BL03400___yvn   1318 VFLCERKKHLFS   1329


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05334 and BL03400

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
