Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05348 and BL03395

See DNA alignment / Visit BSNT_05348 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:27
# Commandline: needle
#    -asequence pep-align/BSNT_05348___uvrA.1.5803.seq
#    -bsequence pep-align/BL03395___uvrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05348___uvrA-BL03395___uvrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05348___uvrA-BL03395___uvrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05348___uvrA
# 2: BL03395___uvrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 957
# Identity:     824/957 (86.1%)
# Similarity:   896/957 (93.6%)
# Gaps:           0/957 ( 0.0%)
# Score: 4347.0
# 
#
#=======================================

BSNT_05348___      1 MAMDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAE     50
                     ||..|||||||||||||||||:||||||||:|||||||||||||||||||
BL03395___uvr      1 MATKRIEVKGARAHNLKNIDVSIPRDQLVVLTGLSGSGKSSLAFDTIYAE     50

BSNT_05348___     51 GQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03395___uvr     51 GQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTV    100

BSNT_05348___    101 GTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKL    150
                     |||||||||||||:||:|||.||.|||||||||||||.||||:||||||:
BL03395___uvr    101 GTVTEIYDYLRLLFARIGKPVCPVHGIEITSQTIEQMTDRILDYPERTKI    150

BSNT_05348___    151 QVLAPIVSGRKGAHVKVLEQIRKQGYVRVRIDGEMAELSDDIELEKNKKH    200
                     ||||||||||||:||||||||||||||||||||||.:||:||||||||||
BL03395___uvr    151 QVLAPIVSGRKGSHVKVLEQIRKQGYVRVRIDGEMNDLSEDIELEKNKKH    200

BSNT_05348___    201 SIEVVIDRIVVKEGVAARLSDSLETALRLSEGRVMIDVIGEEELMFSEHH    250
                     |||||:||||:||||.|||:|||||||||.||||:|||||:|||:|||||
BL03395___uvr    201 SIEVVVDRIVIKEGVTARLTDSLETALRLGEGRVIIDVIGQEELLFSEHH    250

BSNT_05348___    251 ACPHCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDADLVIPNQDLS    300
                     |||||||||||||||:|||||||||||:|||||.|||||.:|||||.:||
BL03395___uvr    251 ACPHCGFSIGELEPRMFSFNSPFGACPSCDGLGSKLEVDVELVIPNDELS    300

BSNT_05348___    301 LKENAVAPWTPISSQYYPQLLEAACTHYGIDMDVPVKDLPKHQLDKVLYG    350
                     |||||:|||.|.||||||:||||.|:|||||||:||:|||||.|:|:|||
BL03395___uvr    301 LKENAIAPWEPQSSQYYPKLLEAVCSHYGIDMDIPVRDLPKHHLEKILYG    350

BSNT_05348___    351 SGDDLIYFRYENDFGQIREGEIQFEGVLRNIERRYKETGSDFIREQMEQY    400
                     ||.:.|||||||||||:||..|:||||:||||||||||.||::||.||:|
BL03395___uvr    351 SGGEQIYFRYENDFGQVRENYIEFEGVIRNIERRYKETSSDYVRELMEKY    400

BSNT_05348___    401 MSQKSCPTCKGYRLKKEALAVLIDGRHIGKITELSVADALAFFKNLTLSE    450
                     |:.:.||:|||||||||:|||||:|.|||||||:|||:||.||:.|.|||
BL03395___uvr    401 MANQPCPSCKGYRLKKESLAVLINGLHIGKITEMSVANALQFFRELDLSE    450

BSNT_05348___    451 KDMQIANLILREIVERLSFLDKVGLDYLTLSRAAGTLSGGEAQRIRLATQ    500
                     |||:|||||||||.|||.||:.||||||||||||||||||||||||||||
BL03395___uvr    451 KDMKIANLILREIEERLGFLNNVGLDYLTLSRAAGTLSGGEAQRIRLATQ    500

BSNT_05348___    501 IGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDT    550
                     |||||:||||||||||||||||||||||..||||||:|||||||||||||
BL03395___uvr    501 IGSRLTGVLYILDEPSIGLHQRDNDRLIETLKNMRDIGNTLIVVEHDEDT    550

BSNT_05348___    551 MMAADYLIDIGPGAGIHGGQVISAGTPEEVMEDPNSLTGSYLSGEKFIPL    600
                     |:|||||||||||||:|||:|||||||||||.|..||||.||||:|||||
BL03395___uvr    551 MLAADYLIDIGPGAGVHGGEVISAGTPEEVMNDDQSLTGQYLSGKKFIPL    600

BSNT_05348___    601 PPERRKPDGRYIEIKGASENNLKKVNAKFPLGTFTAVTGVSGSGKSTLVN    650
                     |.||||||.|:||:|||.|||||.|:.|||||.|||||||||||||||||
BL03395___uvr    601 PAERRKPDNRFIEVKGAKENNLKNVSVKFPLGVFTAVTGVSGSGKSTLVN    650

BSNT_05348___    651 EILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPA    700
                     |||||.||||||:||.|||.:|||||::||||||||||:|||||||||||
BL03395___uvr    651 EILHKTLAQKLHRAKTKPGEYKEIKGIEHLDKVIDIDQSPIGRTPRSNPA    700

BSNT_05348___    701 TYTGVFDDIRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIE    750
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
BL03395___uvr    701 TYTGVFDDIRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACKGDGIIKIE    750

BSNT_05348___    751 MHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALPFFEN    800
                     ||||||||||||||||||||||||:||||||:|||||:||||:|:.||||
BL03395___uvr    751 MHFLPDVYVPCEVCHGKRYNRETLQVTYKGKNISDVLEMTVENAVQFFEN    800

BSNT_05348___    801 IPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHKRSTGRT    850
                     |||||||||||||||||||||||||||||||||||||||||||:|||||:
BL03395___uvr    801 IPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHRRSTGRS    850

BSNT_05348___    851 LYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIV    900
                     ||||||||||||||||||||.|||||||||||||||||||||||.|||::
BL03395___uvr    851 LYILDEPTTGLHVDDIARLLAVLQRLVDNGDTVLVIEHNLDIIKAADYLI    900

BSNT_05348___    901 DLGPEGGAGGGTIVASGTPEEITEVEESYTGRYLKPVIERDKARMKSLLK    950
                     |||||||.|||.|||:|.|||:.:||.|||||||||:|||||.|||..|:
BL03395___uvr    901 DLGPEGGDGGGMIVAAGPPEEVVKVEGSYTGRYLKPIIERDKNRMKKRLQ    950

BSNT_05348___    951 AKETATS    957
                     .||....
BL03395___uvr    951 EKEAVRP    957


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05348 and BL03395

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
