Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05366 and BL03385

See DNA alignment / Visit BSNT_05366 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:29
# Commandline: needle
#    -asequence pep-align/BSNT_05366___cccB.1.5803.seq
#    -bsequence pep-align/BL03385___cccB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05366___cccB-BL03385___cccB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05366___cccB-BL03385___cccB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05366___cccB
# 2: BL03385___cccB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      63/112 (56.2%)
# Similarity:    84/112 (75.0%)
# Gaps:           4/112 ( 3.6%)
# Score: 326.0
# 
#
#=======================================

BSNT_05366___      1 MKSKLSILMIGFALSVLLAACGSNDAKEEKTDTGSKTEATASEGEELYQQ     50
                     ||.||..|.:  |:|.:|||||.|:.:.::.:||.  :|||::|||:|||
BL03385___ccc      1 MKMKLFTLFM--AVSFVLAACGGNNNESKEKNTGG--QATATDGEEIYQQ     46

BSNT_05366___     51 SCVGCHGKDLEGVSGPNLQEVGGKYDEHKIESIIKNGRGNMPKGLVEDNE    100
                     :|.|||||||.|.|.|:|:||||||.|.:|:.|:.||||.||..||::.|
BL03385___ccc     47 NCTGCHGKDLAGGSAPSLKEVGGKYKESEIKDIVVNGRGGMPGNLVDEKE     96

BSNT_05366___    101 AAVIAKWLSEKK    112
                     |..:||||||||
BL03385___ccc     97 AEAVAKWLSEKK    108


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