Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05374 and BL03378

See DNA alignment / Visit BSNT_05374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence pep-align/BSNT_05374___fliT.1.5803.seq
#    -bsequence pep-align/BL03378___fliT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05374___fliT-BL03378___fliT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05374___fliT-BL03378___fliT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05374___fliT
# 2: BL03378___fliT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      63/113 (55.8%)
# Similarity:    86/113 (76.1%)
# Gaps:           0/113 ( 0.0%)
# Score: 329.0
# 
#
#=======================================

BSNT_05374___      1 MNNIDQLYTETKSMLSHIQNTPESDELLKQIEDFVAKRSELIQEISLPLS     50
                     |..|:.||:|||.||:.|:..||||||::.||||:.||..||:||..|||
BL03378___fli      1 MEKIELLYSETKHMLAQIKGAPESDELVQAIEDFLKKRDGLIREIKPPLS     50

BSNT_05374___     51 EEERKQMKLVLTWDQLIVKEMERLKQSIAAELQQMKRKRVMHTTYLNPYN    100
                     |.|::|::.|...:.||:.|::||:|::..||.|.|:||.||.:|:|||.
BL03378___fli     51 ETEKRQLQQVTDMEPLIMAELKRLQQAVKQELLQAKQKRAMHHSYINPYA    100

BSNT_05374___    101 NITIDGTYYDKRK    113
                     |:|||||||||||
BL03378___fli    101 NMTIDGTYYDKRK    113


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