Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05388 and BL03366

See DNA alignment / Visit BSNT_05388 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:31
# Commandline: needle
#    -asequence pep-align/BSNT_05388___yvyF.1.5803.seq
#    -bsequence pep-align/BL03366___yvyF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05388___yvyF-BL03366___yvyF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05388___yvyF-BL03366___yvyF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05388___yvyF
# 2: BL03366___yvyF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:      86/139 (61.9%)
# Similarity:   111/139 (79.9%)
# Gaps:           0/139 ( 0.0%)
# Score: 495.0
# 
#
#=======================================

BSNT_05388___      1 MGELANCPKCNALFLKTKLQTVCQACIKEEEKSFETVYKFLRKQENRQST     50
                     |.:|||||:|||||:|:..||||.:|:||||:::|.|||||:||||||||
BL03366___yvy      1 MSQLANCPRCNALFMKSSFQTVCASCLKEEERAYEIVYKFLKKQENRQST     50

BSNT_05388___     51 LSRITEETGVEEELILKFIRQKRIQITHLPNLAYPCEKCGTSIREGKFCK    100
                     :.:|.|:|||||||||||||||||||::.|||.||||:|||.||||::|.
BL03366___yvy     51 MFQIVEKTGVEEELILKFIRQKRIQISNFPNLGYPCERCGTLIREGRYCM    100

BSNT_05388___    101 DCQSDIKDQMDHLNHEDALKIEKENSKKDTYYAYNTKNS    139
                     .|:.|:..||..|:..:.|:.|:.||.|.|||.:..||.
BL03366___yvy    101 SCEQDLASQMSQLDQLEQLERERNNSSKGTYYTFKPKND    139


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