Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01924 and BL03340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence pep-align/BSNT_01924___yjbE.1.5803.seq
# -bsequence pep-align/BL03340___yjbE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01924___yjbE-BL03340___yjbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01924___yjbE-BL03340___yjbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01924___yjbE
# 2: BL03340___yjbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 167/220 (75.9%)
# Similarity: 190/220 (86.4%)
# Gaps: 2/220 ( 0.9%)
# Score: 841.0
#
#
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BSNT_01924___ 1 MEHDYLISLLVIVGIDLILGGDNAVVIAMASRHLPDKQRKQAIILGTFIA 50
||||.|:|.|||:||||||||||||||||||||||.:||::|||:||.||
BL03340___yjb 1 MEHDILMSFLVIIGIDLILGGDNAVVIAMASRHLPPRQRQKAIIIGTLIA 50
BSNT_01924___ 51 VAMRIGLTSAAVYLLNIPFLQCAGGIFLLYLGYQLLIEKKDTKHIKSSTS 100
:.|||.||.||||||.:|:||..||||||||||||||||||.:|:|..||
BL03340___yjb 51 IMMRIALTMAAVYLLAVPYLQFIGGIFLLYLGYQLLIEKKDAQHVKGGTS 100
BSNT_01924___ 101 LWRAIRTIVLADLFMSLDNVIAVAGASHGEFSLVVIGLCVSVPVIIWGSK 150
|::|||.||:|||||||||||||||||||...|||:||.||||||||||:
BL03340___yjb 101 LFKAIRIIVIADLFMSLDNVIAVAGASHGRLMLVVVGLMVSVPVIIWGSR 150
BSNT_01924___ 151 LIHIALEKIPLLIYAGSGLLAYTGGEMIVRDKKLSLFMAQHGTVETLLPI 200
||..||.|.|||||||||||||||||||||:::||.|||||.|:|.|||:
BL03340___yjb 151 LIQAALAKFPLLIYAGSGLLAYTGGEMIVREQELSSFMAQHSTLEMLLPV 200
BSNT_01924___ 201 LTVAFVILASIYYQQVEK-- 218
|||.|||||||||:|..:
BL03340___yjb 201 LTVIFVILASIYYEQTSEKH 220
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