Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01923 and BL03329

See DNA alignment / Visit BSNT_01923 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence pep-align/BSNT_01923___spxA.1.5803.seq
#    -bsequence pep-align/BL03329___spxA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01923___spxA-BL03329___spxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01923___spxA-BL03329___spxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01923___spxA
# 2: BL03329___spxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:     124/131 (94.7%)
# Similarity:   130/131 (99.2%)
# Gaps:           0/131 ( 0.0%)
# Score: 646.0
# 
#
#=======================================

BSNT_01923___      1 MVTLYTSPSCTSCRKARAWLEEHDIPFVERNIFSEPLSIDEIKQILRMTE     50
                     |||||||||||||||||||||||||||.|||||||||||||||:||||||
BL03329___spx      1 MVTLYTSPSCTSCRKARAWLEEHDIPFTERNIFSEPLSIDEIKEILRMTE     50

BSNT_01923___     51 DGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKR    100
                     ||||||||||||||||||||:|:||||:||:|||||||||||||||||||
BL03329___spx     51 DGTDEIISTRSKVFQKLNVNLETMPLQELYQLINEHPGLLRRPIIIDEKR    100

BSNT_01923___    101 LQVGYNEDEIRRFLPRKVRSFQLREAQRLAN    131
                     |||||||||||||||||||:|||||||||||
BL03329___spx    101 LQVGYNEDEIRRFLPRKVRTFQLREAQRLAN    131


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.