Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03248 and BL03309

See DNA alignment / Visit BSNT_03248 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_03248___yplP.1.5803.seq
#    -bsequence pep-align/BL03309___yplP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03248___yplP-BL03309___yplP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03248___yplP-BL03309___yplP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03248___yplP
# 2: BL03309___yplP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     172/342 (50.3%)
# Similarity:   223/342 (65.2%)
# Gaps:          20/342 ( 5.8%)
# Score: 806.5
# 
#
#=======================================

BSNT_03248___      1 --MNSAPKLNTFQHLIGEHQTFLEAKRIAKQFSLSELPVLITGKIGTGKN     48
                       .::.|.:. |..||||..:||:.|..|.||:.|..|:||.|:.||||.
BL03309___ypl      1 MIKHTYPSVG-FSELIGECDSFLQTKNRAIQFAASSHPILIHGETGTGKE     49

BSNT_03248___     49 HFAHAIHLESSRSNEPFMSVNCSTHSEETLFHELFGPNGNTGVFQKAVRG     98
                     .||.|||..||..::||..|:|||..|:....:.|....|.       .|
BL03309___ypl     50 LFAKAIHSGSSFKDDPFTHVSCSTLDEDETAEDFFLSELNE-------PG     92

BSNT_03248___     99 TLFLDDVWRMPASVQAQLLKALDSDTEKPRMICASA----DRSVEHTFRQ    144
                     |||||:||.:...:|.:||.|::...:| |:|.:|:    :|.....||:
BL03309___ypl     93 TLFLDEVWGLSLHLQGRLLAAIEKGMQK-RLITSSSMPLIERIDSSEFRK    141

BSNT_03248___    145 DLFYRLNILTLTLPELSERKSDIPLLTQHFLSNSGQQFLIDPSVFPVLEK    194
                     ||:||||:|.|.||.||||:||||||..|||.:......::|.|:..||:
BL03309___ypl    142 DLYYRLNVLDLPLPSLSERRSDIPLLVHHFLKSGDHDIYVEPVVWKALEQ    191

BSNT_03248___    195 HAFEGNVRELKNAADYMAAVSSGGTIQPYDLPPYIRGAIDRKTSKKK---    241
                     |.||||||||||..|||..||.|.|||.||.||.:|..|.:|..|.|   
BL03309___ypl    192 HEFEGNVRELKNMTDYMITVSDGKTIQLYDTPPSLREQIKKKKPKDKKTA    241

BSNT_03248___    242 AKLLTLMEKAEFLFILETIKVLNEKGEPASRRIISEHSKNTQTSLTPQQV    291
                     :..||||||.||.|:|:.||.|||||||||||::||.||:.::.||||||
BL03309___ypl    242 SASLTLMEKEEFAFLLDAIKQLNEKGEPASRRVLSELSKSGKSELTPQQV    291

BSNT_03248___    292 RSRLDYLEKKDYVTKSRGRAGTKITFEGLSFIETLKNQMI--    331
                     |||||||||::::||.|||||||||.|||.|:.:||:.:|  
BL03309___ypl    292 RSRLDYLEKREFITKGRGRAGTKITLEGLRFLSSLKHHIIQD    333


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