Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03241 and BL03306
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence pep-align/BSNT_03241___ypmS.1.5803.seq
# -bsequence pep-align/BL03306___ypmS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03241___ypmS-BL03306___ypmS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03241___ypmS-BL03306___ypmS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03241___ypmS
# 2: BL03306___ypmS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity: 112/190 (58.9%)
# Similarity: 143/190 (75.3%)
# Gaps: 3/190 ( 1.6%)
# Score: 597.0
#
#
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BSNT_03241___ 1 MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDSSESEYGFQVTST 50
|.|||.||.||.|:|.::.||...|:.|||.|.:....:.|||...||||
BL03306___ypm 1 MKKWKSLFLILAAVNVMILAGIFILISLPGGQKEPPRPTPSEYQLNVTST 50
BSNT_03241___ 51 KESLAAFVNSYLNDKASNKLDYKVEIDDDVHVAGKIKAFSTSIDAFIAFE 100
|:|||||:|:||..::|..|||::||||:.|:.|.|:|||:::||.::|.
BL03306___ypm 51 KDSLAAFINTYLEKESSPDLDYQIEIDDEFHIVGAIRAFSSTVDARVSFR 100
BSNT_03241___ 101 PTVKKNGDVELNVTKFSLGKLSIPISFVLNYMDSFYELPSFVHVHPGEKS 150
|||:|||||.|:||:||:|||::|||.||||||.||:||.||||....|.
BL03306___ypm 101 PTVEKNGDVVLDVTRFSIGKLNVPISMVLNYMDQFYDLPDFVHVRSDAKE 150
BSNT_03241___ 151 IEVRLSEMPLTNGMYVKADKINLEKDEIEFSYYHPKQ--- 187
|:||||||||.|||||||..|:||||:|||.||.|.|
BL03306___ypm 151 IQVRLSEMPLKNGMYVKAKDIDLEKDQIEFVYYKPAQTDS 190
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