Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03252 and BL03300

See DNA alignment / Visit BSNT_03252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:55
# Commandline: needle
#    -asequence pep-align/BSNT_03252___dfrA.1.5803.seq
#    -bsequence pep-align/BL03300___dfrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03252___dfrA-BL03300___dfrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03252___dfrA-BL03300___dfrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03252___dfrA
# 2: BL03300___dfrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity:     101/169 (59.8%)
# Similarity:   129/169 (76.3%)
# Gaps:           8/169 ( 4.7%)
# Score: 572.0
# 
#
#=======================================

BSNT_03252___      1 MISFIFAMDANRLIGKDNDLPWHLPNDLAYFKKVTSGHSIIMGRKTFESI     50
                     |||.|.|||.|||||||||||||||.||.|||:||.||::||||||||||
BL03300___dfr      1 MISLIAAMDRNRLIGKDNDLPWHLPQDLKYFKEVTKGHAVIMGRKTFESI     50

BSNT_03252___     51 GRPLPNRKNIVVTSAPSSEFPGCTVVGSLKDVLDICSG-PEECFVIGGAQ     99
                     |||||:|:||:|||....:.|.|.|:.|.::.:..... .||||||||:.
BL03300___dfr     51 GRPLPHRENIIVTSNKELDIPNCQVMHSAEEAVRFAKNRNEECFVIGGST    100

BSNT_03252___    100 LYTDLFPYADRLYMTKIHHEFEGDRHFPKFDESNWKLVSSEQGIKDEKNP    149
                     |||::.|:||:||:|||...|||||:||:|.|:.|::||..:|:||:|||
BL03300___dfr    101 LYTEILPFADKLYVTKIDETFEGDRYFPEFSEAEWEIVSRRKGLKDDKNP    150

BSNT_03252___    150 YDYEFLMYEKKNSSKAGGF    168
                     ||||||:|::|.       
BL03300___dfr    151 YDYEFLVYQRKG-------    162


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.