Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00196 and BL03272

See DNA alignment / Visit BSNT_00196 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00196___yacP.1.5803.seq
#    -bsequence pep-align/BL03272___yacP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00196___yacP-BL03272___yacP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00196___yacP-BL03272___yacP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00196___yacP
# 2: BL03272___yacP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:     117/170 (68.8%)
# Similarity:   128/170 (75.3%)
# Gaps:          32/170 (18.8%)
# Score: 599.0
# 
#
#=======================================

BSNT_00196___      1 MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQSYTGNRVIV     50
                                                     :||||||||||||.||||
BL03272___yac      1 --------------------------------MIQKMAEYQSYTGFRVIV     18

BSNT_00196___     51 VFDAHLVKGLEKKQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHV    100
                     |||||||||:|||:.|||||||||:||||||||||||...||:|.|||||
BL03272___yac     19 VFDAHLVKGIEKKKVNHRVEVIFTRENETADERIEKLVSDLNSIQTQIHV     68

BSNT_00196___    101 ATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGK    150
                     |||||||||||||||||||||||||||||.|||:||.||::||||:||||
BL03272___yac     69 ATSDYTEQWAIFGQGALRKSARELLREVEAIERQIENRVKQITSERPAGK    118

BSNT_00196___    151 IALSEEVLKTFEKWRRGDLD    170
                     |.|||:||:.||||||||||
BL03272___yac    119 IPLSEDVLRIFEKWRRGDLD    138


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