Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02801 and BL03234

See DNA alignment / Visit BSNT_02801 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence pep-align/BSNT_02801___glnR.1.5803.seq
#    -bsequence pep-align/BL03234___glnR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02801___glnR-BL03234___glnR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02801___glnR-BL03234___glnR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02801___glnR
# 2: BL03234___glnR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:     114/135 (84.4%)
# Similarity:   123/135 (91.1%)
# Gaps:           0/135 ( 0.0%)
# Score: 583.0
# 
#
#=======================================

BSNT_02801___      1 MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARSEGNRRLFS     50
                     |||.||||||||||||||||||||||||||||||||:|||||||||||||
BL03234___gln      1 MSDKIRRSMPLFPIGIVMQLTELSARQIRYYEENGLVFPARSEGNRRLFS     50

BSNT_02801___     51 FHDVDKLLEIKHLIEQGVNMAGIKQILAKAEAEPEQKQNEKTKKPMKHDL    100
                     |||||||||||.||||||||||||||.||.|.|.::.:.:|.||..||:|
BL03234___gln     51 FHDVDKLLEIKDLIEQGVNMAGIKQIFAKTENEQKEDKQDKPKKAEKHNL    100

BSNT_02801___    101 SDDELRQLLKNELMQAGRFQRGNTFRQGDMSRFFH    135
                     ||:|||:||||||:||||||||.||||||||||||
BL03234___gln    101 SDEELRKLLKNELIQAGRFQRGTTFRQGDMSRFFH    135


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