Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01528 and BL03188
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence pep-align/BSNT_01528___yhbJ.1.5803.seq
# -bsequence pep-align/BL03188___yhbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01528___yhbJ-BL03188___yhbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01528___yhbJ-BL03188___yhbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01528___yhbJ
# 2: BL03188___yhbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 162/221 (73.3%)
# Similarity: 185/221 (83.7%)
# Gaps: 11/221 ( 5.0%)
# Score: 838.0
#
#
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BSNT_01528___ 1 MIEDETKGENKMNRGRLILTNIIGLIVVLAIIAGGAYYYYQSTNYVKTDE 50
|::||||.|||||||:||||:|||||:||.|.:||||||
BL03188___yhb 1 -----------MSKGRLIATNIIGLIIVLAILAGGAYFYYDSISYVKTDE 39
BSNT_01528___ 51 AKVAGDMAAITAPAAGKVSDWDLDEGKTVKKGDTVAKIKGEQTVDVKSIM 100
|.|||:||.|||||:||::||||.||..|.|.:..|||||||||||||||
BL03188___yhb 40 AHVAGEMADITAPASGKLADWDLKEGSKVSKDEKTAKIKGEQTVDVKSIM 89
BSNT_01528___ 101 DGTIVKNEVKNGQTVQAGTTIAQTIDMDNLYITANIKETDIADIEVGNSV 150
||||||||.|.||.||||.|:|:|||||:|||||||:|.|:.|||.|:.|
BL03188___yhb 90 DGTIVKNEAKEGQIVQAGQTLAKTIDMDHLYITANIEENDLKDIEKGDKV 139
BSNT_01528___ 151 DVVVDGDPDTTFDGTVEEIGYATNSTFDMLPSTNSSGNYTKVTQKIPVKI 200
|:|||||..|||:|.|||||||||||||:|..:||||||||||||:||||
BL03188___yhb 140 DIVVDGDSGTTFEGNVEEIGYATNSTFDLLSQSNSSGNYTKVTQKVPVKI 189
BSNT_01528___ 201 SIKNPSDKVLPGMNASVKISE 221
||||||||||||||||||||:
BL03188___yhb 190 SIKNPSDKVLPGMNASVKISK 210
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