Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01585 and BL03173
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence pep-align/BSNT_01585___yhcR.1.5803.seq
# -bsequence pep-align/BL03173___yhcR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01585___yhcR-BL03173___yhcR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01585___yhcR-BL03173___yhcR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01585___yhcR
# 2: BL03173___yhcR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1228
# Identity: 747/1228 (60.8%)
# Similarity: 920/1228 (74.9%)
# Gaps: 54/1228 ( 4.4%)
# Score: 3802.5
#
#
#=======================================
BSNT_01585___ 1 ----MMRRILHIVLITALMFLNVMYTFEAVKAAEPQQPISIEKAIQQKEG 46
:..|.:..:.||.:|..:.:..|..|..| .:.||:|:||:..||
BL03173___yhc 1 MVNVVKSRFMAGLTITFMMIASFLTPFADVTHA--SETISVEEAIKHNEG 48
BSNT_01585___ 47 QALVEGYAVGQAVSPQHYKLTSPFSNDYNVALADRKNETSPDHILPVQIP 96
.|.||||.||..:|..||:.:..|:||||||:||:|.||||::|||||||
BL03173___yhc 49 HAAVEGYVVGHTISSGHYRFSGNFANDYNVAIADKKEETSPENILPVQIP 98
BSNT_01585___ 97 SAFRSQFGLQTNPLLLGKKITVQGKLDNYFNTTGLKNVQSMNVTDDTKTP 146
:.||.||||:|||.|:|||:.::|:...|||:.|||:|||:..:.|....
BL03173___yhc 99 APFRDQFGLKTNPHLIGKKLIIEGERTTYFNSPGLKSVQSITFSGDDAPS 148
BSNT_01585___ 147 PAEQQVTINEARGRLNEEVTIKGIITADQNAIGGGKLSTFLQDETGGINI 196
...:..||.|||..|||.|.||||:||||.|:||||||||:||:|.||||
BL03173___yhc 149 AQPETKTIAEARKLLNETVKIKGIVTADQAAVGGGKLSTFIQDDTAGINI 198
BSNT_01585___ 197 YSPSPEQFPELKEGMDVTVTGKITSYQGLKEIVPSSSGIKINQSNQSLPA 246
||.:...||||||||.|:||||||:|:||.||||:.|||::.....:||.
BL03173___yhc 199 YSAAQGDFPELKEGMSVSVTGKITTYKGLTEIVPAPSGIEVTGEGAALPD 248
BSNT_01585___ 247 PKHLTINELINGSLGDQYEGRLVKLTAFVSSIPSSPAGGGYNVTMIDDDH 296
|..|||.::::.....:||||||::..|:.:.|.:|||||||:||||:::
BL03173___yhc 249 PVPLTIKDVLDQGTAAEYEGRLVRMKGFIETKPDAPAGGGYNITMIDENY 298
BSNT_01585___ 297 HAMTLRVMNETGVIDELDEGKWYDFTGVLSRYQTFQLLPRKSADLKLLE- 345
|.:|||||.:|.....:::|:||:.||:||||.:.||||||..||:.|:
BL03173___yhc 299 HPLTLRVMEQTNAAASIEQGQWYEITGILSRYDSVQLLPRKQEDLRKLDG 348
BSNT_01585___ 346 -EQPAPPSAEGEYEGIVDRVVDGDTIHLKSPVLGTTKIRFVNVDTPETYH 394
..| ||:||||||.:|:|||||||||||.||||:||:|:||:||.||||
BL03173___yhc 349 AAHP-PPAAEGEYESVVERVVDGDTIHLKEPVLGSTKVRYVNIDTAETYH 397
BSNT_01585___ 395 TPKNDADENQLRFGKKASDYLKTVLSPGDKITVKVGSEAKDSYGRLLGQV 444
.|||:.|||||:.|.||.:||:::|:||||:|||||.||||||||||.||
BL03173___yhc 398 KPKNELDENQLQHGNKAKEYLQSILAPGDKVTVKVGKEAKDSYGRLLAQV 447
BSNT_01585___ 445 LTESGSNVNLELVKNGYAPTYFIWPVDNEEDYQQFQAAVAAAKKDQKGIW 494
:||.|.|.||:||:.|.|.|||||||.::||||.||.||..||.|:.|||
BL03173___yhc 448 ITEDGVNTNLQLVQKGMAVTYFIWPVGSDEDYQLFQNAVKKAKGDKIGIW 497
BSNT_01585___ 495 NENDPLMEMPFEFRAREQGKGLTRYVGDSSNKTYVQPADWKKIAVENRIF 544
|..|||:|||||||.|||||||||:||||:..|||.|..|::|.||.|||
BL03173___yhc 498 NPADPLLEMPFEFRDREQGKGLTRHVGDSAENTYVAPEKWREIPVERRIF 547
BSNT_01585___ 545 FASASEAESAGY-KKTQTAPQEHVPLRILSMNDLHGKIDQQYELDLDGNG 593
||||.|||:||| ||.|:. ::|||:||||||||||||||:|||:|:|
BL03173___yhc 548 FASAEEAEAAGYSKKEQSG---NIPLRLLSMNDLHGKIDQQYQLDLNGDG 594
BSNT_01585___ 594 IADGTFGRMDYAAAYLKEKKAEKKNSLIVHAGDMIGGSSPVSSLLQDEPT 643
..|||||||||||:.:||||||::|:||||||||||||||||||||||||
BL03173___yhc 595 RTDGTFGRMDYAASLIKEKKAEQENTLIVHAGDMIGGSSPVSSLLQDEPT 644
BSNT_01585___ 644 VELMEDIGFDVGTVGNHEFDEGTDELLRILNGGDHP--KGTNGYDGQNFP 691
||:||:|||||||||||||||||:||||:||||:|| |||.|||||:||
BL03173___yhc 645 VEVMEEIGFDVGTVGNHEFDEGTEELLRMLNGGEHPEGKGTKGYDGQDFP 694
BSNT_01585___ 692 LVCANCKMKSTGEPFLPAYDIINVEGVPVAFIGVVTQSAAGMVMPEGIKN 741
|||||||:|::|:.|||.|:||.||||||||||||||:||.|||||||::
BL03173___yhc 695 LVCANCKLKASGDSFLPPYEIIEVEGVPVAFIGVVTQAAANMVMPEGIRS 744
BSNT_01585___ 742 IEFTDEVTAVNEAANELKKKGVKAIAVLAHMSAEQNTNAITGESADLANK 791
||||||..|||:||.||:.||::||||||||:|.|:...:|||||:||.|
BL03173___yhc 745 IEFTDEAKAVNQAAKELRAKGIRAIAVLAHMTASQDGGVVTGESAELAKK 794
BSNT_01585___ 792 TDSEIDVIFAAHNHQVVNGEVNGKLIVQAFEYGKAIGVVDVEIDKTTKDI 841
.|.|||||||.|||:||||:||..|||||:||||||||||:|||:.||||
BL03173___yhc 795 ADPEIDVIFAGHNHEVVNGQVNDILIVQAYEYGKAIGVVDLEIDRETKDI 844
BSNT_01585___ 842 VKKSAEIVYVDQSKIEPDVSASAILKKYETIAEPIISEVVGEAAVDMEGG 891
|.|.|||.||:|..::||.:...||.|||.:..|||||.|||||.||.||
BL03173___yhc 845 VHKKAEIEYVNQENLKPDPAVGQILDKYERMVAPIISEKVGEAAHDMAGG 894
BSNT_01585___ 892 YSNDGDTPLGNLIADGMRAAMKTDFALMNGGGIREALKKGPITWGDLYNI 941
||||||||||||||||||.||.:|||||||||||:.||||.||||||:||
BL03173___yhc 895 YSNDGDTPLGNLIADGMRQAMNSDFALMNGGGIRQDLKKGTITWGDLFNI 944
BSNT_01585___ 942 QPFGNVLTKLEIKGKDLREIINAQISPVFGPDYSISGFTYTWDKETGKAV 991
|||||||.:|||||:||.:||:|||||.:|||||||||.||||.:|.|..
BL03173___yhc 945 QPFGNVLVRLEIKGRDLYDIIDAQISPSYGPDYSISGFAYTWDPKTNKTA 994
BSNT_01585___ 992 DLKMADGTEIQPDATYTLTVNNFMATATGAKYQPIGLLGKNPVTGPEDLE 1041
.:.:.|||.|..|.|||||||||||:|:|:||.||..|||||||||||:|
BL03173___yhc 995 AIFLEDGTPIDLDQTYTLTVNNFMASASGSKYLPISRLGKNPVTGPEDIE 1044
BSNT_01585___ 1042 ATVEYVKSFDEPIAYTKEGRI-KLAE-----------ASDIEDPVTEDPI 1079
|||::||||.||||||.|||| |||| .:|.:|
BL03173___yhc 1045 ATVKFVKSFKEPIAYTAEGRIKKLAEDDSRPGEQPGRGADPDD------- 1087
BSNT_01585___ 1080 TEKPGD---DPVTEDPIKEDP----RPGEDLPDIKETPGTAPVHQLPPSA 1122
.||||. ||..|:....|. :||.| .|.:|||....:|
BL03173___yhc 1088 KEKPGSGGADPNDEEKPSGDKGDGGKPGND-------TGESPVHDGTGNA 1130
BSNT_01585___ 1123 ISRFNEIPINNTKTAD----TANSISTLPLQTETAESGSDHQLPDTSAGY 1168
||...||:....|.: .|..:..|.......:...:.:||||:|.|
BL03173___yhc 1131 -SRSGAIPVAGMTTGEGSDAPAEKMDGLSNDAFLPDEREERKLPDTAAAY 1179
BSNT_01585___ 1169 YNFMVIGAAVTLSGTYLYVRRKRSASRT 1196
..|::.|....:.|..||: |||..:|.
BL03173___yhc 1180 GGFLLYGFLTFMFGAILYM-RKRGIARL 1206
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