Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05356 and BL03117
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence pep-align/BSNT_05356___yvkB.1.5803.seq
# -bsequence pep-align/BL03117___yvkB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05356___yvkB-BL03117___yvkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05356___yvkB-BL03117___yvkB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05356___yvkB
# 2: BL03117___yvkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 57/192 (29.7%)
# Similarity: 101/192 (52.6%)
# Gaps: 4/192 ( 2.1%)
# Score: 245.0
#
#
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BSNT_05356___ 1 MRPTNKRILDAAMQLLVKKGYRATTTKEIAEKANVSEATIFRNFKNKQGL 50
|:.||:||:.||:.|:.|.|:::.|.|:||..:.|||.|::|:||.|.||
BL03117___yvk 1 MQETNERIISAALDLMQKYGFKSVTIKDIALHSGVSEMTVYRHFKTKLGL 50
BSNT_05356___ 51 VEALLSQHS---SNRGSILEQTEGDLYKDLLHIGTCLLEELEHRKDIIKI 97
:||.:.|.| :.:.........:|.|||..|....|..:|..|.:..|
BL03117___yvk 51 LEAAVQQFSYIPAFQRVFENDITWNLEKDLTLIAESYLLHMEKNKPLYLI 100
BSNT_05356___ 98 SFREPAMFQDVINHVTEYPQSMKQLLVDYLKTMGEKGVIQTGNEAEHADV 147
:.::.....|:...:.::.:.:...|.||.:||.:|.:::.|:....|..
BL03117___yvk 101 AVQDGGRMTDLFGSLLKHMEELLCYLTDYFRTMQDKNLMKKGDADSQAFA 150
BSNT_05356___ 148 FMSIIFGYFIHRLHLGDRVISMPQEKMLEHSTALFVKGISAD 189
|:|.::|||......|.|...:.::..::..||.|..|:..
BL03117___yvk 151 FLSSLYGYFSSGALAGGRFQKVAKDTYIKQITAAFCGGLHV- 191
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