Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06191 and BL03098

See DNA alignment / Visit BSNT_06191 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:09
# Commandline: needle
#    -asequence pep-align/BSNT_06191.1.5803.seq
#    -bsequence pep-align/BL03098___sdpR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06191-BL03098___sdpR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06191-BL03098___sdpR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06191
# 2: BL03098___sdpR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 96
# Identity:      46/96 (47.9%)
# Similarity:    63/96 (65.6%)
# Gaps:          20/96 (20.8%)
# Score: 247.5
# 
#
#=======================================

BSNT_06191         1 ----------------MDLLKQQDLTAGQIADQFDMSKPSISHHLNILKN     34
                                     ::|||.:|:|||:|:|||.|||||||.||.|||.
BL03098___sdp      1 MNQTFKALADPTRRKILNLLKDRDMTAGEISDQFQMSKPSISQHLKILKQ     50

BSNT_06191        35 TDLVRDQKKGQFIIYSLNTTVLQDLIGWFFSLTDTDHDKKEGGE--     78
                     .:|::|:||||:||||||||:.|::|||.||.  |:...|:.|:  
BL03098___sdp     51 AELIQDEKKGQYIIYSLNTTMFQEIIGWAFSF--TEQAGKDKGDAK     94


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