Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01442 and BL03043

See DNA alignment / Visit BSNT_01442 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:57
# Commandline: needle
#    -asequence pep-align/BSNT_01442___ygaD.1.5803.seq
#    -bsequence pep-align/BL03043___ygaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01442___ygaD-BL03043___ygaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01442___ygaD-BL03043___ygaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01442___ygaD
# 2: BL03043___ygaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity:     472/580 (81.4%)
# Similarity:   539/580 (92.9%)
# Gaps:           0/580 ( 0.0%)
# Score: 2486.0
# 
#
#=======================================

BSNT_01442___      1 MGVMKRYMQFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGG     50
                     |||::|||:||||||.:|.:||||||:||||||.:||||||||||||||.
BL03043___yga      1 MGVIRRYMEFVKPYKWKIVLTVLIGIIKFSIPLVIPLLLKYVVDDIIQGS     50

BSNT_01442___     51 GTASDKTTSLFTIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAK    100
                     |||.:||::||.:||:|||:||:|||||||||||||||||||||||||.|
BL03043___yga     51 GTAEEKTSTLFMVMAVMFAIFLVLRPPVEYYRQYFAQWTASKVLYDIRDK    100

BSNT_01442___    101 LFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTI    150
                     ||.||||||||:|||||.||:||||||||||||:|||.||||:|||::||
BL03043___yga    101 LFAHIQKLSLRYYANTRAGEIISRVINDVEQTKEFVIIGLMNVWLDVMTI    150

BSNT_01442___    151 LIVISIMLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQV    200
                     .|.|:||:|:||||||||||||||||:|||:|||||||||||||||||:|
BL03043___yga    151 FIAIAIMMTMDVKLTLISIVLFPLYGLSVKFFYGRLRKLTRERSQALAEV    200

BSNT_01442___    201 QGHLHERIQGMPVIRSFAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFA    250
                     |||||||:|||||||||||||:||.||:.:||:||.||||||.|||||||
BL03043___yga    201 QGHLHERVQGMPVIRSFAIEDYEQKQFDHENGNFLGKAIRHTAWNAKTFA    250

BSNT_01442___    251 VVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLIN    300
                     ||||:|||||||:|..|||.||:|.|||||||||.|||:|:|||:|||||
BL03043___yga    251 VVNTVTDLAPLIIITVAGYHVIHGNLTVGTMVAFFGYIERLYNPLRRLIN    300

BSNT_01442___    301 SSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQNVSFQY    350
                     ||||||||||||||:||||||||:|.|||||:||::::|.|||:||||||
BL03043___yga    301 SSTTLTQSIASMDRLFEFIDEPYDLKDKPNAVKAERLKGIVEFKNVSFQY    350

BSNT_01442___    351 EKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLL    400
                     ||.:|.||.|:|||..||||||||||||||||||||||||||||::|.|.
BL03043___yga    351 EKSEEMILQDLSLKAERGETVALVGMSGGGKSTLVSLIPRFYDVSAGSLE    400

BSNT_01442___    401 IDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIE    450
                     |||.|:|||||||||||:||||||||||||::||||:||.|:|::|:|||
BL03043___yga    401 IDGIDVRDYEARSLRNQIGMVLQDTFLFSESVRENISIGNPEASMEDIIE    450

BSNT_01442___    451 AAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLL    500
                     ||||||||:|||..|:||:|:|||||||||||||||||||||||||||||
BL03043___yga    451 AAKAANAHDFIMELPQGYDTKVGERGVKLSGGQKQRISIARVFLKNPPLL    500

BSNT_01442___    501 ILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVME    550
                     |||||||||||||||||||||:|||||||||:||||||||||||||||:|
BL03043___yga    501 ILDEATSALDLESEHYIQEAMEKLAKDRTTFIVAHRLSTITHADKIVVIE    550

BSNT_01442___    551 NGTIIEIGTHDELMDYESQYKHLFTIQNLN    580
                     ||.:.|||||||||..:..||||||||.||
BL03043___yga    551 NGRVAEIGTHDELMSRDGHYKHLFTIQKLN    580


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01442 and BL03043

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
