Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01402 and BL03028

See DNA alignment / Visit BSNT_01402 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence pep-align/BSNT_01402.1.5803.seq
#    -bsequence pep-align/BL03028___yfiX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01402-BL03028___yfiX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01402-BL03028___yfiX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01402
# 2: BL03028___yfiX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 856
# Identity:     541/856 (63.2%)
# Similarity:   671/856 (78.4%)
# Gaps:           6/856 ( 0.7%)
# Score: 2854.0
# 
#
#=======================================

BSNT_01402         1 MLIKKNALSILKIVFPIAVLLFVIYQSKKELTNLSFKRTLMVINGLERTD     50
                       :|||||:||:||.|.||||||.:|:||||..||||.|.::|:.:.|.|
BL03028___yfi      1 --MKKNALAILRIVIPAAVLLFVFFQAKKELAGLSFKETFLIIDQINRID     48

BSNT_01402        51 LFMLVLIGLLAVAAMSLYDYVLKYSLRLSITNGKVFRVSWIANSFNNVLG    100
                     ||:||.:||.|:.||:|||:||..||.:.::..|..:|||||||.|||||
BL03028___yfi     49 LFILVFLGLAAILAMTLYDFVLVRSLGMKVSKWKTIKVSWIANSLNNVLG     98

BSNT_01402       101 FGGLAGVGLRMMLYKEHTKDHKALVKGIAWLTSSMLLGLSVFSIFVAARV    150
                     ||||:|.|||.:|||||..|.|.|::|||||.||:||||||.|:.|.|.:
BL03028___yfi     99 FGGLSGAGLRTILYKEHVDDVKKLIRGIAWLASSVLLGLSVLSLLVLAGI    148

BSNT_01402       151 LPVDEVIHEKPWLWAVVIGFALILPLSLAVSKIKDRKAGDEENADKVKNP    200
                     ||..::..||.|:...|.|.|:|.|.:..:..||.:::...|...:: :.
BL03028___yfi    149 LPAGDLFTEKTWVLLAVAGTAMIAPGAAVILMIKKKRSRGAEKGMRL-SV    197

BSNT_01402       201 IFAYIGASVVEWLMAGIVIYFALFAMGIHADIRYVFGVFVIAAIGGMISL    250
                     .|:|:||||:||:.|..|:|::|..||:..|::.|.|||.||::.|||||
BL03028___yfi    198 FFSYLGASVIEWVAAAAVMYYSLATMGVELDLKTVIGVFTIASVAGMISL    247

BSNT_01402       251 VPGGFGSFDLLFLLGMEQLGYHQEAIVTSIVLYRLAYSFIPFILGLFFAA    300
                     |||||||||||||:||.|||..||..:|:|||||:|||||||:.||.|||
BL03028___yfi    248 VPGGFGSFDLLFLVGMSQLGVDQEITLTAIVLYRIAYSFIPFVFGLIFAA    297

BSNT_01402       301 GDLTENTMKRLETNPRIAPAIETTNVLLVVQRAVLVRILQGSLSLIVFVA    350
                     .|||.|||||||..|.|||||||||:||::.||:|.|:|.||||:|.|.:
BL03028___yfi    298 ADLTGNTMKRLEEKPIIAPAIETTNILLILHRALLFRLLNGSLSVIAFCS    347

BSNT_01402       351 GLIVLASVSLPIDRLTVIPHIPRPALLLFNGLSLSSALILLILPIELYKR    400
                     |.||:|||:|||||:|:||:|.:..|:.|||||||..|||||||:|||:|
BL03028___yfi    348 GAIVIASVALPIDRITLIPNISKFMLVFFNGLSLSFGLILLILPLELYRR    397

BSNT_01402       401 TKRSYTMAITALVGGFVFSFLKGLNISAIFVLPMIIVLLVLLKKQFVREQ    450
                     |||||.|.:|||...|:|:..||.||||:|::|::..|.|||:.||.||:
BL03028___yfi    398 TKRSYYMTLTALALAFLFTLFKGFNISAVFMIPVVFALFVLLRGQFTRER    447

BSNT_01402       451 ASYTLGQLIFAVALFTVALFNYNLIAGFIWDRMKKVLRHEYFVHSTSHIT    500
                     |.||.||:.:...:|...|.|||:||..||:.:..:|..:||:||..|:.
BL03028___yfi    448 AVYTFGQIAWGAFIFLFTLLNYNIIASHIWEALGHLLVKDYFIHSERHVD    497

BSNT_01402       501 HATIMAIIIVPLFFLIFTVVYHKRTKPIGEQADPERLAAFLNEKGGNALS    550
                     .||..|:..|||:|.:|...::::||.|||:.|||:|.|||.||||||||
BL03028___yfi    498 FATFFALFFVPLYFAVFIWAFNRKTKEIGEEPDPEKLEAFLEEKGGNALS    547

BSNT_01402       551 HLGFLGDKRFYFSSDGNALLLFGKIARRLVVLGDPSGQRESFPLVLEEFL    600
                     ||||||||||::|||||||:.|.|:.:||||||||||:.:|||||::|||
BL03028___yfi    548 HLGFLGDKRFFYSSDGNALIQFAKVGQRLVVLGDPSGREDSFPLVIKEFL    597

BSNT_01402       601 NEAHQKGFSVLFYQIEREDMALYHDFGYNFFKLGEEAYVDLNTFTLTGKK    650
                     :.|.|||:.|:|||||||||||||||||.||||||||.|||:|||::|||
BL03028___yfi    598 HAADQKGYLVIFYQIEREDMALYHDFGYRFFKLGEEAIVDLDTFTISGKK    647

BSNT_01402       651 KAGLRAINNRFEREEYTFRVDHPPFSDAFLEELKQISDEWLGSKKEKGFS    700
                     :||||||.||||||.|||.|:.||||..||.||:|:||||||.|||||||
BL03028___yfi    648 RAGLRAIYNRFEREGYTFHVEQPPFSREFLNELRQVSDEWLGRKKEKGFS    697

BSNT_01402       701 LGFFDPSYLQKAPIAYMKNAEGEIVAFANVMPMYQEGEISVDLMRYRGDA    750
                     ||||...||||||||.:|:.|||||||.|:||||:|||||:|||||...|
BL03028___yfi    698 LGFFQEDYLQKAPIAVLKSEEGEIVAFMNIMPMYREGEISIDLMRYSKKA    747

BSNT_01402       751 PNGIMDALFIRMFLWAKEEGCTSFNMGMAPLANVGTAFTSFWSERFAAVI    800
                     |.||||||||.:|.|.||:|.|:||||||||:||||.|.|||:||.||||
BL03028___yfi    748 PKGIMDALFIYLFQWGKEQGYTAFNMGMAPLSNVGTTFQSFWTERLAAVI    797

BSNT_01402       801 FNNVRYMYSFSGLRAFKEKYKPEWRGKYLAYRKNRSLSVTMFLVTRLIGK    850
                     ||||.|||||||||:|||||||.||||||||||||||.|||.|||||||:
BL03028___yfi    798 FNNVSYMYSFSGLRSFKEKYKPVWRGKYLAYRKNRSLPVTMILVTRLIGR    847

BSNT_01402       851 SKKDSV    856
                     ..|   
BL03028___yfi    848 RTK---    850


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01402 and BL03028

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
