Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02902 and BL03023

See DNA alignment / Visit BSNT_02902 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence pep-align/BSNT_02902___xynB.1.5803.seq
#    -bsequence pep-align/BL03023___xynB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02902___xynB-BL03023___xynB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02902___xynB-BL03023___xynB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02902___xynB
# 2: BL03023___xynB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 556
# Identity:     188/556 (33.8%)
# Similarity:   282/556 (50.7%)
# Gaps:          64/556 (11.5%)
# Score: 774.5
# 
#
#=======================================

BSNT_02902___      1 ----MKITNPVLKGFNPDPSICRAGEDYYIAVSTFEWFPGVQIHHSKDLV     46
                         ...|||||.||:|||||.|.|||||:..|||::||.:.|.||||||
BL03023___xyn      1 MSGEHTYTNPVLTGFHPDPSIIRVGEDYYMVNSTFQYFPAIVISHSKDLV     50

BSNT_02902___     47 NWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSYSDGKFWLIYT----DVK     92
                     :|.::.|.:.....||:....:|.|:|||.:||.:|.|::..|    ...
BL03023___xyn     51 HWKIIGHGITENEGLDLSDINDSHGIWAPDISYHNGTFYIFATHRLNGPT    100

BSNT_02902___     93 VVDGAWKDCHNYLVTCETINGDWSEPITLN-SSGFDASLFHDKDGKKYL-    140
                     |::|........::......|.:|:|:.:: .||.|.|.|.|.|||.|: 
BL03023___xyn    101 VINGRKLIRRQIMIKSSRPEGPYSKPVFIDEGSGIDPSHFVDGDGKHYML    150

BSNT_02902___    141 ---------LNMLWDHRIDRHSFGGIVIQEYSDKEQKLIGKPKVIFEGTD    181
                              ||                 :|.:|    :.|:|..|:|||.
BL03023___xyn    151 LSPACTLFPLN-----------------EECTD----ISGEPVQIWEGTG    179

BSNT_02902___    182 RKLTEAPHLYHIGNYYYLLTAEGGTRYEHAATIARSANIEGPYEVHPDNP    231
                     |:..|.|||.....|||.:.|||||.|.|:.|.|||.::.||||..|.||
BL03023___xyn    180 RRAPEGPHLLKKDGYYYAILAEGGTGYSHSITTARSTHLYGPYEPCPYNP    229

BSNT_02902___    232 ILTSWHDPGNPLQKCGHASIVQTHTDEWYLAHLTGRPIHPDDDSIFQQRG    281
                     |||. .||..|:|:.||..:|:|...||:..:|.|||         .|..
BL03023___xyn    230 ILTQ-TDPDAPIQRAGHGKLVETQNGEWWAVYLCGRP---------NQGS    269

BSNT_02902___    282 YCPLGRETAIQKLYWKDEWPYVVGGKEG-SLEVDAPSIPETIFEATYPEV    330
                     |..:|||||:..:.|.|:..:|:...:| ||...||::|:..::.  ...
BL03023___xyn    270 YTTVGRETALDPVEWTDDGWFVINNLKGPSLVQRAPNLPQVKWDE--KNF    317

BSNT_02902___    331 DEFEDSTLNINFQTLRIPFTNELGSLTQAPNHLRLF-GHESLTSTFTQAF    379
                     |:|::.||.:::|.:|.| .:...||.:.|.:|||: |...|.....:..
BL03023___xyn    318 DDFDEDTLGLDWQFVRNP-DHSSWSLIERPGYLRLWTGDWDLHDIRAKNT    366

BSNT_02902___    380 VARRWQSLHFEAETAVEFYPENFQQAAGLVNYYNTENWTALQVTHDEELG    429
                     |.||.:...:.|...::|.|....:.||:|.||:|.|:....:.::|.  
BL03023___xyn    367 VVRREKHHLYSAGVKLDFSPSASGEQAGIVCYYSTNNYLKCCLIYEEG--    414

BSNT_02902___    430 RILELTICDNFSFSQ-PLNNKIVIPREVKYVYLRVNIEKDKYYYFYSFNK    478
                       |::.:.:|.|..| .|..|   ..|...::|:..|.|.|..::||:..
BL03023___xyn    415 --LKIKVVENRSGCQKTLGKK---HAEAGPLFLKAVINKQKRDFYYSYEG    459

BSNT_02902___    479 EDWHKIDIALESKKLSDDYIRGGGFFTGAFVGMQCQD-TSGNHIPADFRY    527
                     :.||......::..|||:..|.....||..||:...: .||....|||.:
BL03023___xyn    460 KHWHHAGGTEDASFLSDEGSRDAKGHTGTMVGIFANNGGSGRKAAADFDW    509

BSNT_02902___    528 FRYKEK    533
                     |||...
BL03023___xyn    510 FRYIAY    515


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