Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02491 and BL02990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence pep-align/BSNT_02491___ylbH.1.5803.seq
# -bsequence pep-align/BL02990___ylbH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02491___ylbH-BL02990___ylbH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02491___ylbH-BL02990___ylbH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02491___ylbH
# 2: BL02990___ylbH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 108/188 (57.4%)
# Similarity: 123/188 (65.4%)
# Gaps: 38/188 (20.2%)
# Score: 557.0
#
#
#=======================================
BSNT_02491___ 1 ----------------------------------MIGPYFDGGMGLDLFA 16
|:||||:||.||||:|
BL02990___ylb 1 MRVISGTYKGRALKAVPGTSTRPTTDKVKESIFNMVGPYFEGGTGLDLYA 50
BSNT_02491___ 17 GSGGLGIEALSRGFEHCIFVDRDFKAIQTVKSNLKTLELTKHAQVYRNDA 66
||||||||||||||:..||||||||||||||.|||||.|.|.|:||||||
BL02990___ylb 51 GSGGLGIEALSRGFDRFIFVDRDFKAIQTVKGNLKTLGLEKCAEVYRNDA 100
BSNT_02491___ 67 ERALHAAAKRETGFRGIFLDPPYKEQKLKALLTLIDEYQMLEEDGFIVAE 116
||||||..||...|..:||||||:||||:|||::|||..||.|.||||||
BL02990___ylb 101 ERALHALVKRGASFDAVFLDPPYREQKLEALLSIIDEADMLTERGFIVAE 150
BSNT_02491___ 117 HDREVELPETVGDLVMTRKETYGLTGVAIYKKRG---- 150
|.:||.||:..|.|.:.|:|.||||||.||:|||
BL02990___ylb 151 HAKEVMLPDAAGGLQLARQEIYGLTGVTIYRKRGNGDG 188
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