Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03523 and BL02909

See DNA alignment / Visit BSNT_03523 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_03523___yqjZ.1.5803.seq
#    -bsequence pep-align/BL02909___yqjZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03523___yqjZ-BL02909___yqjZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03523___yqjZ-BL02909___yqjZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03523___yqjZ
# 2: BL02909___yqjZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      65/124 (52.4%)
# Similarity:    86/124 (69.4%)
# Gaps:          13/124 (10.5%)
# Score: 374.0
# 
#
#=======================================

BSNT_03523___      1 MDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVES     50
                       .:|||||||||||||:||::..|.||.||||.|:.|||:||||||.||
BL02909___yqj      1 --MISKTPEPPYYAVIFTSVRTNGDNGYKETAENMLKLAAEQPGFLGAES     48

BSNT_03523___     51 VREADGRGITVSYWDSMDAINHWKHHTEHQAAKEKGKSVWYESYAVRVAK    100
                     .|:.:|:|||||||:|::||..||.|.||:.|||||::.||..:|||:||
BL02909___yqj     49 ARDMNGKGITVSYWESLEAIEKWKFHGEHRQAKEKGRTEWYSDFAVRIAK     98

BSNT_03523___    101 IERQRLFQENTND-----------    113
                     :|..|:.:.:...           
BL02909___yqj     99 VEDARISERSGRPPSDGTSGEEMQ    122


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.