Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01611 and BL02895

See DNA alignment / Visit BSNT_01611 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:05
# Commandline: needle
#    -asequence pep-align/BSNT_01611___yhdC.1.5803.seq
#    -bsequence pep-align/BL02895.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01611___yhdC-BL02895.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01611___yhdC-BL02895.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01611___yhdC
# 2: BL02895
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      57/108 (52.8%)
# Similarity:    79/108 (73.1%)
# Gaps:           3/108 ( 2.8%)
# Score: 306.5
# 
#
#=======================================

BSNT_01611___      1 MKSLPYTIALLFCGLIIVSMAAKGH-STDTNESVQKWEQLAWSKIQDEYK     49
                     ||....|  ..||.|.::|..|||| .||..::.::||::|||.::::||
BL02895            1 MKKRYCT--YFFCILTLLSFPAKGHFQTDVFDAPERWERIAWSALEEKYK     48

BSNT_01611___     50 GASFSDYAYMGRTEVNDQQTKDVFRVTVRQKDDTFSVRAEVYFHPVTNHM     99
                     ||...||.|:|||:|||::|||||||||.|:..:||..||||||||||.:
BL02895           49 GAKLEDYEYLGRTQVNDEETKDVFRVTVNQEGKSFSAHAEVYFHPVTNAI     98

BSNT_01611___    100 ISINVFRL    107
                     |::|:|.|
BL02895           99 INVNIFPL    106


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