Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02196 and BL02894
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence pep-align/BSNT_02196___hmp.1.5803.seq
# -bsequence pep-align/BL02894___hmp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02196___hmp-BL02894___hmp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02196___hmp-BL02894___hmp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02196___hmp
# 2: BL02894___hmp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity: 197/410 (48.0%)
# Similarity: 271/410 (66.1%)
# Gaps: 17/410 ( 4.1%)
# Score: 972.5
#
#
#=======================================
BSNT_02196___ 1 MLDNKTIEIIKSTVPVLQQHGETITGRFYDRMFQDHPELLNIFNQTNQKK 50
||..||::|:|||.|||::.|..||..||.|||..||||.||||.:.|:.
BL02894___hmp 1 MLSEKTMQIVKSTAPVLKEKGTEITTCFYKRMFDAHPELKNIFNMSRQQT 50
BSNT_02196___ 51 KTQRIALANAVIAAAANIDQLGNIIPVVKQIGHKHRSIGIKPEHYPIVGK 100
..|..|||..|:.||.|||:|.:::||||||||||:|:.:|||||||||:
BL02894___hmp 51 GGQPKALAFTVLQAAENIDRLEDLLPVVKQIGHKHKSLHVKPEHYPIVGQ 100
BSNT_02196___ 101 YLLIAIKDVLGDAATPDIMQAWEKAYGVIADAFIGIEKDMYEQAEEQAGG 150
:||.||:.|||:|||.||:|||.:||..||..||.:||.|||:.::|.|.
BL02894___hmp 101 HLLEAIEIVLGEAATEDILQAWAEAYEEIARVFIEVEKQMYEEDKKQDGN 150
BSNT_02196___ 151 WKEYKPFAIAKKERESKEITSFYLKPEDGKPLPEFQAGQYISIKVRIPDF 200
|:.:|||.|..|..||..||||||||.||..||.|..|||:|:.::||..
BL02894___hmp 151 WEGFKPFVIMDKRVESDTITSFYLKPADGTALPAFSPGQYVSVCIKIPGE 200
BSNT_02196___ 201 EYTHIRQYSLSDMPGKDYYRISVKKD-------GVVSSYLHDGLQEGDSI 243
.|...|||||||...|||||||||.: |.||||||:.::.|.|:
BL02894___hmp 201 PYFLTRQYSLSDAWNKDYYRISVKLEAEEGQPVGKVSSYLHENMEIGGSL 250
BSNT_02196___ 244 EISAPAGDFVLDHASQKDLVLISAGVGITPMISMLKTSVSKQPERQILFI 293
|:|||||||.|...:.:.:..||||.||||::||::|...|:..|:|.|:
BL02894___hmp 251 EVSAPAGDFTLSEGTDRPVYFISAGSGITPVMSMVQTLAQKESRREITFV 300
BSNT_02196___ 294 HAAKNSEYHALRHEVEE-AAKHSAVKTAFVY---REPTEEDRAGDLHFHE 339
||||...:||.:.|.|: ...:.|.:..||| .|.||| |..:
BL02894___hmp 301 HAAKTERHHAFKEETEKLLGANPANRLLFVYSRGAEATEE------HTVK 344
BSNT_02196___ 340 GQIDQQFLKELIANTDADYYICGSPSFITAMHKLVSELGSAPESIHYELF 389
|:::::.||.::.:.:.::|:||..||:.::.:.:..||.:.|:|.||.|
BL02894___hmp 345 GRVNEELLKSVVIDPNGEFYVCGPLSFMKSVIEGLQNLGVSMENIRYESF 394
BSNT_02196___ 390 GPQLSLAQSV 399
...|.:..:.
BL02894___hmp 395 ASSLDMQIAN 404
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