Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01622 and BL02892
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence pep-align/BSNT_01622___lytE.1.5803.seq
# -bsequence pep-align/BL02892___lytE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01622___lytE-BL02892___lytE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01622___lytE-BL02892___lytE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01622___lytE
# 2: BL02892___lytE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 205/334 (61.4%)
# Similarity: 246/334 (73.7%)
# Gaps: 57/334 (17.1%)
# Score: 1053.5
#
#
#=======================================
BSNT_01622___ 1 MKKQIITATTAVVLGSTLFAGAASAQSIKVKKGDTLWDLSRKYDTTISKI 50
||||:|||.:||||||||||||||||:|.||||||||..|:||.||:|||
BL02892___lyt 1 MKKQVITAASAVVLGSTLFAGAASAQTITVKKGDTLWGFSKKYGTTVSKI 50
BSNT_01622___ 51 KSENHLRSDIIYVGQTLSINGKSTSSKSSSSSSSSSTYKVKSGDSLWKIS 100
|.||.|:|||||:||.||||| |:||.:.:|..||:|:||..||||||||
BL02892___lyt 51 KQENKLKSDIIYIGQRLSING-SSSSSAKASKVSSATHKVVKGDSLWKIS 99
BSNT_01622___ 101 KKYGMTINELKKLNGLKSDLLRVGQVLKLKGSTSSSSSSSSKVSSSSTST 150
:.||||:||||.|||||:||:|:|||||:||:.|..::|::|.|:||
BL02892___lyt 100 RTYGMTVNELKTLNGLKTDLIRIGQVLKVKGTKSVKAASTTKPSASS--- 146
BSNT_01622___ 151 YKVKSGDSLSKIASKYGTTVSKLKSLNGLKSDVIYVNQVLKVKGTSTSSS 200
|||.:|:
BL02892___lyt 147 -------------------------------------------GTSKTSA 153
BSNT_01622___ 201 KPASSSSSSSSKTSSTSLNVSKLVSDAKALVGTPYKWGGTTTSGFDCSGF 250
||..|| :||.||||||||||:|||||||||:|||||||||
BL02892___lyt 154 -PAQKSS---------TLNTSKLVSDAKALIGTPYKWGGTSTSGFDCSGF 193
BSNT_01622___ 251 IWYVLNKQTSVGRTSTAGYWSSMKSIASPSVGDFVFFTTYKSGPSHMGIY 300
:||:|||||:|.||:|.|||:||||::||:||||||||||:.||||||:|
BL02892___lyt 194 VWYILNKQTNVARTNTVGYWNSMKSVSSPAVGDFVFFTTYQPGPSHMGVY 243
BSNT_01622___ 301 IGNNSFIHAGSDGVQISSLNNSYWKPRYLGAKRF 334
||||.|:|||||||.||.:.||||||||||||||
BL02892___lyt 244 IGNNQFVHAGSDGVTISDMTNSYWKPRYLGAKRF 277
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