Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01657 and BL02875

See DNA alignment / Visit BSNT_01657 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence pep-align/BSNT_01657___dat.1.5803.seq
#    -bsequence pep-align/BL02875___dat.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01657___dat-BL02875___dat.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01657___dat-BL02875___dat.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01657___dat
# 2: BL02875___dat
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     179/284 (63.0%)
# Similarity:   225/284 (79.2%)
# Gaps:           3/284 ( 1.1%)
# Score: 939.5
# 
#
#=======================================

BSNT_01657___      1 MKVLVNGRLIGRSEASIDLEDRGYQFGDGIYEVIRVYKGVLFGLREHVER     50
                     ||||.|||||.|||.::|:||||||||||:|||||:|.|:||.|.||:.|
BL02875___dat      1 MKVLFNGRLIERSECAVDIEDRGYQFGDGVYEVIRIYNGILFTLDEHIAR     50

BSNT_01657___     51 FFRSAAEIGISLPFSIEDLEWDLQKLVQENAVSEGAVYIQTTRGVAPRKH    100
                     .::|||||||.|.||..:|:..|::||..|.:.||.:|:|.|||.|||||
BL02875___dat     51 LYKSAAEIGIDLSFSEAELKSQLKELVDINQMREGGLYLQVTRGKAPRKH    100

BSNT_01657___    101 QYEAGLEPQTTAYTFTVKKPEQEQAYGVAAITDEDLRWLRCDIKSLNLLY    150
                     ||.|||.||.|||||.::|||:||..||:|||.:|:||||||||||||||
BL02875___dat    101 QYGAGLTPQVTAYTFPIQKPEKEQQNGVSAITADDMRWLRCDIKSLNLLY    150

BSNT_01657___    151 NVMTKQKAYEAGAFEAILLRDGVVTEGTSSNVYAVINGTVRTHPANRLIL    200
                     |||.||||:||.:|||||:|||:||||||||||.|....:.||||..|||
BL02875___dat    151 NVMIKQKAHEASSFEAILIRDGLVTEGTSSNVYVVKQNAIYTHPATTLIL    200

BSNT_01657___    201 NGITRMNILGLIEKNGIKLDETPVSEEELKQAEEIFISSTTAEIIPVVTL    250
                     ||||||.:|.|.|:||:...|..|:::||..|:|:||:|||||:|||.::
BL02875___dat    201 NGITRMKVLQLCEENGLNYVEKAVTKDELLNADEVFITSTTAEVIPVTSI    250

BSNT_01657___    251 DGQSVGSGKPGPVTKQLQAAFQESI--QQAASIS    282
                     |||::|||.|||:||.:|.|.|.||  :.|.:: 
BL02875___dat    251 DGQTIGSGAPGPLTKNVQTALQNSILSETAKTV-    283


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