Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01687 and BL02868

See DNA alignment / Visit BSNT_01687 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_01687___yhaR.1.5803.seq
#    -bsequence pep-align/BL02868___yhaR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01687___yhaR-BL02868___yhaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01687___yhaR-BL02868___yhaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01687___yhaR
# 2: BL02868___yhaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     149/274 (54.4%)
# Similarity:   193/274 (70.4%)
# Gaps:          19/274 ( 6.9%)
# Score: 758.0
# 
#
#=======================================

BSNT_01687___      1 MYRRKKKESVYLEVLHMEFVQYACNGAVAEIILNRPDAHHALNEQLLSEL     50
                                     ||::::.....:.||:|||.:|::||||::|.||
BL02868___yha      1 ----------------MEYIKWKDEDGIFEIVLNRSEAYNALNEKMLEEL     34

BSNT_01687___     51 KEAVEMAAASEALIVLLRGSGKGFSAGGDIRMMTSEHDPDQFKRLMDTIE    100
                     .||:.:|..||:|::|:|||||||||||||:||.|..|.|...|::|||.
BL02868___yha     35 NEALRVAEESESLLLLVRGSGKGFSAGGDIKMMLSSGDQDSSARVIDTIS     84

BSNT_01687___    101 AVTLNLYQMKKVTIAAIHGAAAGLGLSLALCADIVLAEKNAVLAMNFIGI    150
                     .:.:.||.|.|:|.||:|||||||||||||..|.||.||.|.||||||||
BL02868___yha     85 EIAVKLYSMPKMTTAAVHGAAAGLGLSLALSCDHVLVEKEAKLAMNFIGI    134

BSNT_01687___    151 GLVPDGGGHYLLKKRIGEAKAKKLIWSGKKLSASEAADMGLLDGTFAGDP    200
                     |||||||||:.|::||||..||:||||||||:.:||.::.:.|..|:||.
BL02868___yha    135 GLVPDGGGHFFLERRIGETAAKELIWSGKKLTGAEAHELRIADAVFSGDS    184

BSNT_01687___    201 AEGARPIIETLLASPLLAMIETKAIFQSLQIEELKKVLSLERSAQERMRR    250
                     ...||..:|.||.:||.||||||.|:|:|....|:|.|.||::||.:||.
BL02868___yha    185 GRFARIYLEKLLHAPLAAMIETKKIYQALNGGRLQKTLELEKTAQMKMRL    234

BSNT_01687___    251 TKDHQEGIRAFLEKREPKFQA---    271
                     |.|||||||||||||:|:|..   
BL02868___yha    235 TSDHQEGIRAFLEKRQPQFNRQQV    258


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