Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05945 and BL02832

See DNA alignment / Visit BSNT_05945 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:01
# Commandline: needle
#    -asequence pep-align/BSNT_05945___yxkF.1.5803.seq
#    -bsequence pep-align/BL02832___yxkF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05945___yxkF-BL02832___yxkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05945___yxkF-BL02832___yxkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05945___yxkF
# 2: BL02832___yxkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:      82/309 (26.5%)
# Similarity:   139/309 (45.0%)
# Gaps:          28/309 ( 9.1%)
# Score: 278.5
# 
#
#=======================================

BSNT_05945___      1 -MKSLLAIYPGSIVSEELCIREGCLCFFDESNQRYISIPKTEISEKEVLV     49
                      ::.|..:|...:|..:...:...|.|..:..:.: .:.|:.::::|..:
BL02832___yxk      1 MLEKLKTLYGERMVGSKAVSKHDALWFQTDEGETF-GVLKSAVTDREKEL     49

BSNT_05945___     50 LQSFLTPADEGNQLSMKSPEENKWFSFLFSRGELPAYIKKRTRFVHFHLF     99
                     |.....|..|.::....:..|.:|..:.|.  :.|.......:.:..|.|
BL02832___yxk     50 LYCLFRPFSEPHRPQQLTKREKEWHEYFFC--DAPLQNPGNIQLIQGHFF     97

BSNT_05945___    100 ----GKIERTSFTEAVRHFW--PVSFVIVWIHEDRGVIVEQESEAAAKKG    143
                         ...||.:..|||..|:  |   ::||......|||.:.......|.
BL02832___yxk     98 KMEHAPEERQAIKEAVSGFFKDP---LVVWYDRHEAVIVHENPSPFLAKK    144

BSNT_05945___    144 ELESLAKVLESDFYFSVRFYAGRFYEPDECL--RKHYTREQAYFLFAEKR    191
                     ||..||..|.|||..:..|::|:.:..:..|  :..:.::..:::.....
BL02832___yxk    145 ELSELADALTSDFMATPVFFSGQLHPVNGSLQGKIRFEKQMFHYMLEAGD    194

BSNT_05945___    192 LPQVQSVTFEMIFP-FLLLETEKEKLETLLSEEAELLFGSEAELRKTIKL    240
                     :..|  .||....| ||..:.|:....:......|.|  |:.|...|||.
BL02832___yxk    195 IGNV--ATFCQCLPSFLTAKPERVHASSFSDAVREAL--SDPETSLTIKT    240

BSNT_05945___    241 FIENNSNVTLTAKKLHLHRNSLQYRIDKFIERSGIDIKSYKGALLAYFI-    289
                     ::..|.|.:||||:|.:|||||||||||||||:.|||:.::.|...|.: 
BL02832___yxk    241 YMRCNLNASLTAKRLFIHRNSLQYRIDKFIERTAIDIRQFEEAAAVYLMM    290

BSNT_05945___    290 -CLQNESSE    297
                      .|      
BL02832___yxk    291 HLL------    293


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