Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00203 and BL02802
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_00203___rplA.1.5803.seq
# -bsequence pep-align/BL02802___rplA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00203___rplA-BL02802___rplA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00203___rplA-BL02802___rplA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00203___rplA
# 2: BL02802___rplA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 217/232 (93.5%)
# Similarity: 225/232 (97.0%)
# Gaps: 0/232 ( 0.0%)
# Score: 1118.0
#
#
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BSNT_00203___ 1 MAKKGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRLGV 50
|||||||||||||||||:|||||:||:.|||||||||||||||.||||||
BL02802___rpl 1 MAKKGKKYVEAAKLVDRTKAYDVNEAIELVKKTNTAKFDATVEAAFRLGV 50
BSNT_00203___ 51 DPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADFVGDTDY 100
|||||||||||||||||||||||||||||||||||||||||||:|||.||
BL02802___rpl 51 DPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGDADY 100
BSNT_00203___ 101 INKIQQGWFDFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVE 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02802___rpl 101 INKIQQGWFDFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVE 150
BSNT_00203___ 151 KAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAK 200
||:.|||||||||||||||||||||||||||:.||||||.||||||||||
BL02802___rpl 151 KAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEEGKLVENFATMYDTILKAK 200
BSNT_00203___ 201 PAAAKGVYVKNVAVTSTMGPGVKVDSSTFNVK 232
||||||||||||:||||||||:|||.||||||
BL02802___rpl 201 PAAAKGVYVKNVSVTSTMGPGIKVDPSTFNVK 232
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