Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00208 and BL02798
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:52
# Commandline: needle
# -asequence pep-align/BSNT_00208___rpoB.1.5803.seq
# -bsequence pep-align/BL02798___rpoB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00208___rpoB-BL02798___rpoB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00208___rpoB-BL02798___rpoB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00208___rpoB
# 2: BL02798___rpoB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1193
# Identity: 1101/1193 (92.3%)
# Similarity: 1127/1193 (94.5%)
# Gaps: 47/1193 ( 3.9%)
# Score: 5693.0
#
#
#=======================================
BSNT_00208___ 1 -----------------------------------------------MFQ 3
|||
BL02798___rpo 1 MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQ 50
BSNT_00208___ 4 DISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLIN 53
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 51 DISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLIN 100
BSNT_00208___ 54 KETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKV 103
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 101 KETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKV 150
BSNT_00208___ 104 DKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALG 153
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 151 DKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALG 200
BSNT_00208___ 154 FGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPTVEN 203
|||||||:||||||||||||||||||||:|||||||||||||||||||||
BL02798___rpo 201 FGSDQEIIDLIGENEYLRNTLDKDNTENTDKALLEIYERLRPGEPPTVEN 250
BSNT_00208___ 204 AKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG 253
||||||||||||||||||:|||||||||||||||||||||||||||||||
BL02798___rpo 251 AKSLLDSRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLVDPETG 300
BSNT_00208___ 254 EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIF 303
|||||||.||||||||||||||||||||:||||||||||||||||||||:
BL02798___rpo 301 EILAEKGAILDRRTLDKVLPYLENGIGFKKLYPNGGVVEDEVTLQSIKIY 350
BSNT_00208___ 304 APTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDD 353
|||||||||.|||||||||||.:|||||:|||:|||||||||||||||||
BL02798___rpo 351 APTDQEGEQTINVIGNAYIEEGVKNITPSDIIASISYFFNLLHGVGDTDD 400
BSNT_00208___ 354 IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLIN 403
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 401 IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLIN 450
BSNT_00208___ 404 IRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAG 453
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 451 IRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAG 500
BSNT_00208___ 454 MEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRRV 503
|||||||||||||||||||||||||||||||||:||||||||||||||||
BL02798___rpo 501 MEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFGFIETPYRRV 550
BSNT_00208___ 504 DPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGEN 553
||||||||.||||||||||||||||||||||:|:|:|:||||||||||||
BL02798___rpo 551 DPETGKVTPRIDYLTADEEDNYVVAQANARLNDDGSFVDDSIVARFRGEN 600
BSNT_00208___ 554 TVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPL 603
|||.::||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 601 TVVPKDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPL 650
BSNT_00208___ 604 MQPEAPFVGTGMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDG 653
||||:|.|||||||||.|||||||||:||||||||||||:||||||||||
BL02798___rpo 651 MQPESPIVGTGMEYVSAKDSGAAVICRHPGIVERVEAKNIWVRRYEEVDG 700
BSNT_00208___ 654 QKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPSMEL 703
||||||||||||||||||||||||||||||||||||.||||||||||||.
BL02798___rpo 701 QKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVEKGEILADGPSMEK 750
BSNT_00208___ 704 GELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEAR 753
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 751 GELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEAR 800
BSNT_00208___ 754 DTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVTPKG 803
|||||||||||||||||||||||||:|||||:||||||||||||||||||
BL02798___rpo 801 DTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDLLVGKVTPKG 850
BSNT_00208___ 804 VTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE 853
|||||||||||||||||||||||||||||||||||||.||||||||||||
BL02798___rpo 851 VTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDE 900
BSNT_00208___ 854 LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDG 903
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 901 LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDG 950
BSNT_00208___ 904 TPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDV 953
|||||||||||||||||||||||||:|||||.||:|:|||||||||||||
BL02798___rpo 951 TPIDIMLNPLGVPSRMNIGQVLELHLGMAARRLGLHVASPVFDGAREEDV 1000
BSNT_00208___ 954 WETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDKLHA 1003
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 1001 WETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDKLHA 1050
BSNT_00208___ 1004 RSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKS 1053
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02798___rpo 1051 RSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKS 1100
BSNT_00208___ 1054 DDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSGDEE 1103
||||||||||||||||||||||||||||||||||||||||||||||.|||
BL02798___rpo 1101 DDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSSDEE 1150
BSNT_00208___ 1104 EIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE 1146
|||||||||:|||||.:||:|..|||.||..|||.||||||||
BL02798___rpo 1151 EIEMRDLEDDEDAKQNEGLSLPNDEESEELVSADAERDVVTKE 1193
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