Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03378 and BL02780

See DNA alignment / Visit BSNT_03378 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:17
# Commandline: needle
#    -asequence pep-align/BSNT_03378___cheR.1.5803.seq
#    -bsequence pep-align/BL02780___cheR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03378___cheR-BL02780___cheR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03378___cheR-BL02780___cheR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03378___cheR
# 2: BL02780___cheR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     187/256 (73.0%)
# Similarity:   218/256 (85.2%)
# Gaps:           1/256 ( 0.4%)
# Score: 995.0
# 
#
#=======================================

BSNT_03378___      1 MDTYSVFTTKWKQLTGVDLTLYKEAQMKRRLTSLYEKKGFQSFKDFAAAL     50
                     ||.||.|..|||::|||||.|||||||||||||||||||:..|::||.||
BL02780___che      1 MDNYSFFVDKWKKMTGVDLALYKEAQMKRRLTSLYEKKGYGDFREFALAL     50

BSNT_03378___     51 EKEQALLNETLDRMTINVSEFYRNYKRWEVLETAILPLIKTSRPLKIWSA    100
                     ||.:|||.||||||||||||||||||||||||..||||:|.::.||:|||
BL02780___che     51 EKNEALLQETLDRMTINVSEFYRNYKRWEVLEKTILPLLKPAKTLKVWSA    100

BSNT_03378___    101 ACSTGEEPYTLAMLLDQQKGLPGYQILATDIDEKALEKAKKGVYQERSLQ    150
                     |||||||||||:|:|.:||||..|||:|||||:|.|:|||:|||||||||
BL02780___che    101 ACSTGEEPYTLSMILSRQKGLTDYQIIATDIDDKVLQKAKEGVYQERSLQ    150

BSNT_03378___    151 EVPLSVKDRYFTQNANRSYEVKTEIKKNITFKKHNLLADRYEQDFDLIVC    200
                     |||..:|:.||||:.|| ::||.||:|||.|:|||||||.||:|||:|||
BL02780___che    151 EVPKEMKELYFTQDGNR-FKVKDEIRKNIRFQKHNLLADPYEKDFDIIVC    199

BSNT_03378___    201 RNVFIYFTESAKEELYLKMAHSLKKNGVLFVGSTEQIFNPEKFGLVPADT    250
                     |||.|||||.|||::|.|.:.|||..|:||||||||||||||:|....||
BL02780___che    200 RNVLIYFTEEAKEKIYHKFSGSLKNKGILFVGSTEQIFNPEKYGFQSTDT    249

BSNT_03378___    251 FFYQKR    256
                     |||||.
BL02780___che    250 FFYQKS    255


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