Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03344 and BL02754
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence pep-align/BSNT_03344___cca.1.5803.seq
# -bsequence pep-align/BL02754___cca.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03344___cca-BL02754___cca.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03344___cca-BL02754___cca.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03344___cca
# 2: BL02754___cca
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 233/397 (58.7%)
# Similarity: 313/397 (78.8%)
# Gaps: 0/397 ( 0.0%)
# Score: 1239.0
#
#
#=======================================
BSNT_03344___ 1 MEKVFIKALPVLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPD 50
||.:|:||||:||.|.:.|.|||||||||||:.|.|.:||:||||||:|:
BL02754___cca 1 MEDLFLKALPLLRELKKHGWQAYFVGGAVRDAQMNRDVGDIDIATDASPE 50
BSNT_03344___ 51 QVERLFQRTVDVGKEHGTIIVLWEDETYEVTTFRTESDYVDFRRPSEVQF 100
::|.:|.:||||||||||||||:|.|:|||||||.|.:|.|:||||.|||
BL02754___cca 51 EIEAIFPKTVDVGKEHGTIIVLFEGESYEVTTFRAELEYEDYRRPSGVQF 100
BSNT_03344___ 101 ISSLEEDLKRRDLTINAMAMTADGKVLDYFGGKKDIDQKVIRTVGKPEDR 150
|.||:|||||||||||||||..:|:::|||||.:||.:::|:|||.|.:|
BL02754___cca 101 IKSLKEDLKRRDLTINAMAMDEEGRLIDYFGGLRDIRERLIQTVGDPAER 150
BSNT_03344___ 151 FQEDALRMLRAVRFMSQLGFTLSPETEEAIAKEKSLLSHVSVERKTIEFE 200
|.|||||||||:||||||.|.|||.|::||.:.:.||:|:|.||||:|||
BL02754___cca 151 FHEDALRMLRALRFMSQLEFELSPNTKKAICENRPLLAHISTERKTVEFE 200
BSNT_03344___ 201 KLLQGRASRQALQTLIQTRLYEELPGFYHKRENLISTSEFPFFSLTSREE 250
|||:|:|:.:||:...:|.||:||||...|:|.:::...|||:.|....:
BL02754___cca 201 KLLKGKAAGRALEAAAETGLYKELPGLDGKKERVLAARAFPFYQLQKSAD 250
BSNT_03344___ 251 LWAALLINLGIVLKDAPLFLKGWKLPGKVIKEAIHIADTFGQSLDVMTMY 300
:|||.:..:.|...:|..||||||||||||::|:|.|:...|..|.::||
BL02754___cca 251 IWAAFIHMISINPAEAHRFLKGWKLPGKVIRQALHTAERIDQKWDAVSMY 300
BSNT_03344___ 301 RAGEKALLSAAKISQLRQNEKLDEKKLKDIQYAYQNLPIKSLKDLDITGK 350
.|||:.||:|:.|..||..:.:||::|.:|:.:||.|||||||||.::|.
BL02754___cca 301 EAGEETLLAASAIRSLRDKQAIDEEQLAEIRQSYQALPIKSLKDLAVSGS 350
BSNT_03344___ 351 DLLALRNRPAGKWVSEELQRIEQAVVTGKLSNQKKHIEEWLKTCGQH 397
|||..|.:|||||||::|:|||:||:.|:|:||||.|||||.:|.|.
BL02754___cca 351 DLLNFRKKPAGKWVSDDLKRIERAVLNGELANQKKAIEEWLDSCSQI 397
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