Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03312 and BL02728

See DNA alignment / Visit BSNT_03312 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:00
# Commandline: needle
#    -asequence pep-align/BSNT_03312___ypqA.1.5803.seq
#    -bsequence pep-align/BL02728___ypgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03312___ypqA-BL02728___ypgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03312___ypqA-BL02728___ypgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03312___ypqA
# 2: BL02728___ypgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:      62/140 (44.3%)
# Similarity:   100/140 (71.4%)
# Gaps:           2/140 ( 1.4%)
# Score: 335.0
# 
#
#=======================================

BSNT_03312___      1 MEFYDDKKNELQKKEEIITEAIDTLFQSSAFGNLINGFQNLINSSLKDVQ     50
                     |:|.::..:.|.||:| |.||::.||.:|.|.:::|.||.||:..|::..
BL02728___ypg      1 MDFKENDNHSLSKKDE-IQEAVEQLFYNSPFHDILNSFQKLISDQLQNST     49

BSNT_03312___     51 TTILVRERDTGLYIDITIPATFRDGEIVVDVKSRYLHVTLQEKQKHQNEA    100
                     .::.:||.|..||:||.:|.:|::|:|:::.||||||:.|:|||:....:
BL02728___ypg     50 ISMNIREDDGALYVDIAVPESFQNGDIMIEAKSRYLHIALKEKQESGGSS     99

BSNT_03312___    101 TFTSMTRTVQLPYEVRQEDMETSWNEQTMTL-FFPKNKHE    139
                     :|||::|||.|||.||:|.|:||||...:|: |..:.|||
BL02728___ypg    100 SFTSLSRTVLLPYPVREETMKTSWNRNVLTVSFSEQKKHE    139


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