Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02742 and BL02713
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence pep-align/BSNT_02742___pbpX.1.5803.seq
# -bsequence pep-align/BL02713___pbpX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02742___pbpX-BL02713___pbpX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02742___pbpX-BL02713___pbpX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02742___pbpX
# 2: BL02713___pbpX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 228/396 (57.6%)
# Similarity: 287/396 (72.5%)
# Gaps: 12/396 ( 3.0%)
# Score: 1113.0
#
#
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BSNT_02742___ 1 MTSPTRRRTAKHRRRKLNKRGKLLLGLLAVMVCITIWNAL---HRNSEEN 47
.:.|.|...|.|:::..||..::...| :||..|:.|| .|:.:||
BL02713___pbp 1 -MARTYRTRIKKRKKQKTKRRLIIFSFL--VVCGLIYLALPSGMRDHQEN 47
BSNT_02742___ 48 EPSQETAAVSNTDQKKEVKKKTAKKSEEQIKTVDRNQKISNYLEEIGFSG 97
: .|.|...:..:.||:..:...||| :|.|.:.|.::..||:.|||||
BL02713___pbp 48 Q-LQATEKKAQPEAKKKPTQNETKKS--KIVTKNDNAQLDQYLKSIGFSG 94
BSNT_02742___ 98 TAMIVRNGEIVTNKGFGYADRKHYIQNNPLTSFYVGSSQKALIATAILQL 147
||:||.:|::||:||:.||:|:..:.|.|.|.|||||||||:||||||||
BL02713___pbp 95 TALIVEDGKVVTSKGYLYANREEMVPNTPDTVFYVGSSQKAIIATAILQL 144
BSNT_02742___ 148 EEKGKLQTSDPVSTYLPHFPNGQTITLKNLLTHTSGINGHIEGDGAITPD 197
||||.|..:||||.|||:||||..|||.:.|||||||.||.||.|.|:|:
BL02713___pbp 145 EEKGLLSVNDPVSKYLPNFPNGSKITLYHFLTHTSGIRGHKEGRGYISPE 194
BSNT_02742___ 198 DLIKDIELQGIKRQPGVWDYQDSNYSVLAYIIAEVSGEPYEQYIKNHIFK 247
|||||||.:|:|...|.|||:||||||||||::.|||||.:||||.||||
BL02713___pbp 195 DLIKDIEKRGVKYPTGKWDYRDSNYSVLAYIVSMVSGEPVDQYIKKHIFK 244
BSNT_02742___ 248 PAGMTHAGFYKTYEKEPYPAVGYKMK-GGKTVTPYIPDLSQLYGAGDIYM 296
||||.|||||||:.||..|:.|||:. ..|..||.:||||||||||||||
BL02713___pbp 245 PAGMKHAGFYKTFAKESNPSTGYKLNLQKKLYTPDMPDLSQLYGAGDIYM 294
BSNT_02742___ 297 SAIDMYKFDQALIDGKLYSQKSYEKMFTPGSSSTYGMGFYVDPGSYSNHG 346
:|.|||.||:||.:.|:.|.:|:.||||| :.:||||||||.|||||:||
BL02713___pbp 295 TAYDMYLFDKALYERKIISNESFMKMFTP-NKATYGMGFYVSPGSYSSHG 343
BSNT_02742___ 347 VMPGFNILNSFSKSGQTIVILFSNIQNNAK-LGQVNNKIYQLLNQE 391
||||:|||||||.:|...||||||||||.| .|.|||:|:.:||..
BL02713___pbp 344 VMPGYNILNSFSLTGSRYVILFSNIQNNIKSFGSVNNRIFSILNGF 389
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