Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01975 and BL02667

See DNA alignment / Visit BSNT_01975 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence pep-align/BSNT_01975___yjcD.1.5803.seq
#    -bsequence pep-align/BL02667___yjcD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01975___yjcD-BL02667___yjcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01975___yjcD-BL02667___yjcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01975___yjcD
# 2: BL02667___yjcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 760
# Identity:     541/760 (71.2%)
# Similarity:   625/760 (82.2%)
# Gaps:           1/760 ( 0.1%)
# Score: 2836.0
# 
#
#=======================================

BSNT_01975___      1 MKCARLNDRIIHLHTYSREHYQFLFEEGIKGHLFCSHCGKPVLLRLNIAD     50
                     |||||.|:|.||:|||||||.||||:|..|..:.|.:||.|:.|:|:|.:
BL02667___yjc      1 MKCARFNNRDIHIHTYSREHLQFLFDEARKDRITCKYCGLPLRLKLSIHE     50

BSNT_01975___     51 PPEFIHRQPGDFPACEEAC-EPKPSKEEKKEDDQESGVIRLPKGKAIAAD     99
                     .|.|.||:.|||..||.|| ..|..::.|:.|..||||.||||||||..:
BL02667___yjc     51 EPHFFHRENGDFSQCEAACLNEKTEQKTKQNDYTESGVFRLPKGKAIGEE    100

BSNT_01975___    100 PSPAVTEWHRPRSIKPGTPFVPKTIEPDTSLFPSVGLNTDQLKAVTETEG    149
                     .......|..||.....:||.|........:||:|.||..||.|||..|.
BL02667___yjc    101 KKADTDFWTPPREASIHSPFSPAAETAPEPVFPNVPLNEKQLAAVTAPEE    150

BSNT_01975___    150 PLLVLAGAGSGKTRVLTARAAHMIEHLGIPPENMLLVTFTTKAVAEMKER    199
                     |||||||||||||||||||||:||..|.|||..:||||||||||.|||||
BL02667___yjc    151 PLLVLAGAGSGKTRVLTARAAYMISRLDIPPSAILLVTFTTKAVKEMKER    200

BSNT_01975___    200 MANQYGLQPAKVRRLVTGTFHSLFYKILYHSNSAKWNGEHLLKMEWQREQ    249
                     ||:.|||....|.|||||||||.|||||||.:.||||||||||.|||:||
BL02667___yjc    201 MASLYGLPMQTVNRLVTGTFHSFFYKILYHHDPAKWNGEHLLKWEWQKEQ    250

BSNT_01975___    250 YIKKALYEEGIDEKEFPVDQALQQIGFWKNTYVPNERIPLKDEWEKQVYR    299
                     |||.||.|||:|||:||||||:||||:|||.|:|.|:|||:|||||:|:|
BL02667___yjc    251 YIKMALAEEGLDEKDFPVDQAIQQIGYWKNAYLPGEQIPLEDEWEKRVHR    300

BSNT_01975___    300 LYEHYERQKKEHSQFDFDDMASACYELFIERPDLLEQYQSRFTYILIDEF    349
                     ||.|||.||....|||||||||||::||.|:||:|::||:||..||||||
BL02667___yjc    301 LYRHYEEQKAARRQFDFDDMASACWQLFQEQPDILKRYQTRFHAILIDEF    350

BSNT_01975___    350 QDINPVQYKIMQMLASPEQNLCCVGDDDQSIYAFRGSNPSFILDFQKDYP    399
                     ||||||||.|:::|||||.||.|||||||||||||||:|||||||:||||
BL02667___yjc    351 QDINPVQYAIIKLLASPENNLTCVGDDDQSIYAFRGSSPSFILDFEKDYP    400

BSNT_01975___    400 GAKTIYLTANYRSTHPIVSSADIVVKKNKNRYAKTLEAARDDIQVPVLFY    449
                     .|||:.||.||||:||||:|||:||:|||.|:.|||.|||||.|.|:|||
BL02667___yjc    401 KAKTVRLTTNYRSSHPIVASADMVVRKNKKRFPKTLSAARDDRQKPLLFY    450

BSNT_01975___    450 PYDEEEEATMVVSDIKEKIQNGASPEDFAVLYRTNSGGRAIYERLHQSSI    499
                     ||||||||.|:||||:|||:.||.|:|||:||||||.||||:||||||:|
BL02667___yjc    451 PYDEEEEAIMIVSDIQEKIEMGAKPDDFAILYRTNSSGRAIFERLHQSAI    500

BSNT_01975___    500 PYTADRGVQSFYSRRIVRQILAYLYASQNEDDTEAIKHLLPALFLKQSAL    549
                     ||||::||:||||||||||:|||||.|||:||.||:|.:|||||||||||
BL02667___yjc    501 PYTAEQGVRSFYSRRIVRQMLAYLYLSQNQDDAEAVKQILPALFLKQSAL    550

BSNT_01975___    550 NTLKALSITEDCTMIKALAKLPDLKPFQLDKIKKIVPFFASLRTMKPVEA    599
                     ||||||||||||||::||.||.|:|||||||||||||||..|:|||||||
BL02667___yjc    551 NTLKALSITEDCTMVQALEKLTDIKPFQLDKIKKIVPFFPGLKTMKPVEA    600

BSNT_01975___    600 ITFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRDIKVVAKKFKTIPDFLAH    649
                     |:|||.|||||:|||||||||||||||||||||:|..||||||||:||.|
BL02667___yjc    601 ISFAEEKMGFSDYLKKRGNEGNKLEKGSDDLRDLKTAAKKFKTIPEFLEH    650

BSNT_01975___    650 VDHMRAAEKNRTDEHGVQLMTIHRSKGLEFKTVYVLGTVDGSIPHDFSLE    699
                     |||||||||.:.|.:||||:||||:|||||||||:||..||||||||:||
BL02667___yjc    651 VDHMRAAEKQKADGYGVQLLTIHRAKGLEFKTVYILGVQDGSIPHDFALE    700

BSNT_01975___    700 TARKGDEAALEEERRLLYVAMTRAKQHLYLSCPANRRGKTANRSRFLYPL    749
                     |||||||.||||||||||||||||:..||:|.|:.|||:||.|||||.|:
BL02667___yjc    701 TARKGDETALEEERRLLYVAMTRAEDRLYISVPSFRRGRTAYRSRFLQPI    750

BSNT_01975___    750 LQKARQPLHH    759
                     |:...|....
BL02667___yjc    751 LRPNPQVQLQ    760


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01975 and BL02667

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
