Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01982 and BL02659
See
DNA alignment /
Visit
BSNT_01982 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence pep-align/BSNT_01982___yjcJ.1.5803.seq
# -bsequence pep-align/BL02659___yjcJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01982___yjcJ-BL02659___yjcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01982___yjcJ-BL02659___yjcJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01982___yjcJ
# 2: BL02659___yjcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 391
# Identity: 323/391 (82.6%)
# Similarity: 359/391 (91.8%)
# Gaps: 1/391 ( 0.3%)
# Score: 1673.0
#
#
#=======================================
BSNT_01982___ 1 MSKHNWTLETQLVHNPFKTDGGTGAVSVPIQHASTFHQSSFEEFGAYDYS 50
||..||||||:||||..||||.||||||||||||||||.||::||.||||
BL02659___yjc 1 MSHENWTLETKLVHNQNKTDGATGAVSVPIQHASTFHQDSFDKFGEYDYS 50
BSNT_01982___ 51 RSGTPTRTALEETIAALEGGTRGFAFSSGMAAISTAFLLLSQGDHVLVTE 100
|||||||.|||:|||.||||||||||||||||||:||||||:|||||||:
BL02659___yjc 51 RSGTPTRKALEDTIAELEGGTRGFAFSSGMAAISSAFLLLSKGDHVLVTK 100
BSNT_01982___ 101 DVYGGTFRMVTEVLTRFGIEHTFVDMTDRNEVARSIKPNTKVIYMETPSN 150
||||||:||:||||:|||||||||||||.||:|.:||.||||||:|||||
BL02659___yjc 101 DVYGGTYRMITEVLSRFGIEHTFVDMTDLNEIALNIKENTKVIYLETPSN 150
BSNT_01982___ 151 PTLGITDIKAIVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATK 200
||||||||:.:|:|||.:|||||||||||||||||||:||||||||||||
BL02659___yjc 151 PTLGITDIRGVVKLAKAHGCLTFLDNTFMTPALQRPLELGVDIVLHSATK 200
BSNT_01982___ 201 FLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVLGVQDCWLVLRGLKTL 250
|||||||||||||.|||::||::||||||:||||||||||||||||||||
BL02659___yjc 201 FLSGHSDVLSGLAVVKDKKLGEELYKLQNSFGAVLGVQDCWLVLRGLKTL 250
BSNT_01982___ 251 QVRLEKASQTAQRLAEFFQKHPAVKRVYYPGLADHPGAETHKSQSTGAGA 300
||||||||:|||:|||||:||||||:||||||:.||||..||.|:.||||
BL02659___yjc 251 QVRLEKASRTAQQLAEFFEKHPAVKQVYYPGLSSHPGASIHKHQANGAGA 300
BSNT_01982___ 301 VLSFELESKEAVKKLVENVSLPVFAVSLGAVESILSYPATMSHAAMPKEE 350
|||||||..||||::||||||||||||||||||||||||.||||||||||
BL02659___yjc 301 VLSFELEDAEAVKQVVENVSLPVFAVSLGAVESILSYPAKMSHAAMPKEE 350
BSNT_01982___ 351 REKRGITDGLLRLSVGVEHADDLEHDFEQALKEIAPVAVR- 390
|.||||||||||||||||:||||:.||.|||:.::....|
BL02659___yjc 351 RTKRGITDGLLRLSVGVENADDLQADFAQALEAVSGALARS 391
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.