Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04672 and BL02612
See
DNA alignment /
Visit
BSNT_04672 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence pep-align/BSNT_04672___yueJ.1.5803.seq
# -bsequence pep-align/BL02612___yueJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04672___yueJ-BL02612___yueJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04672___yueJ-BL02612___yueJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04672___yueJ
# 2: BL02612___yueJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 144/183 (78.7%)
# Similarity: 160/183 (87.4%)
# Gaps: 0/183 ( 0.0%)
# Score: 793.0
#
#
#=======================================
BSNT_04672___ 1 MKKALICIDYTNDFVASDGKLTCGEPGRMIEEAIVNLTEEFITNGDYVVL 50
||||||||||||||||:|||||||||||.||:|:..|.:.||.||||||.
BL02612___yue 1 MKKALICIDYTNDFVAADGKLTCGEPGRKIEDAVARLADTFIQNGDYVVF 50
BSNT_04672___ 51 AVDSHAEGDQYHPETRLFPPHNIKGTEGKDLYGKLLPLYQKHEHEPNVYY 100
|||||..||..|||||||||||||||.|:||||||..||:||||:.||||
BL02612___yue 51 AVDSHEAGDTLHPETRLFPPHNIKGTSGQDLYGKLEKLYRKHEHDQNVYY 100
BSNT_04672___ 101 MEKTRYSAFAGTDLELKLRERQIGELHLAGVCTDICVLHTAVDAYNKGFR 150
||||||||||||:||||||||.|.||||.||||||||||||||||||||.
BL02612___yue 101 MEKTRYSAFAGTNLELKLRERDIQELHLVGVCTDICVLHTAVDAYNKGFN 150
BSNT_04672___ 151 IVVHKQAVASFNQEGHAWALSHFANSIGAQVAE 183
:|:|:.||||||.:||.||||||||::||.|::
BL02612___yue 151 LVIHQNAVASFNPDGHDWALSHFANTLGASVSD 183
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.