Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04638 and BL02534
See
DNA alignment /
Visit
BSNT_04638 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence pep-align/BSNT_04638.1.5803.seq
# -bsequence pep-align/BL02534___yuxJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04638-BL02534___yuxJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04638-BL02534___yuxJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04638
# 2: BL02534___yuxJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 248/423 (58.6%)
# Similarity: 285/423 (67.4%)
# Gaps: 71/423 (16.8%)
# Score: 1275.0
#
#
#=======================================
BSNT_04638 0 -------------------------------------------------- 0
BL02534___yux 1 MQLSHFIYNEREFKFFKKVIRISVYKKNLVIMWFANFFVAASSTMVLPFL 50
BSNT_04638 1 ---------------------MFGITFLMAFLVSPFWGRFGDKRGYKKIL 29
:||:||||||||||||||||||.||||||
BL02534___yux 51 SLYIETLGSYSDGFTAKWSGYVFGVTFLMAFLVSPFWGRFGDKHGYKKIL 100
BSNT_04638 30 MATGTGIALSIFFMGFVTSVYQLFFLRMAMGLVTGFIPTSLAMISAQTPK 79
:.|||||..||..|..|:|||:||||||||||||||||||||||||||||
BL02534___yux 101 LITGTGIGTSILLMSLVSSVYELFFLRMAMGLVTGFIPTSLAMISAQTPK 150
BSNT_04638 80 SSAGKTLGTLQMGQVSGSLFGPLLGGMLADRFGFTYTFFITSFVIFSSVL 129
.:|||.|||||||.|||.||||||||:||||.|||||||||||.|:|:|.
BL02534___yux 151 KTAGKVLGTLQMGTVSGGLFGPLLGGLLADRVGFTYTFFITSFAIYSAVF 200
BSNT_04638 130 LVLFGVKEKPLAEKTAKRTSYSRKEVLSYIFHHPALWVMMLLTMLIQTGN 179
||..||:|:||.:|......|:||:||..|.|...|...|:||.:||.||
BL02534___yux 201 LVFAGVRERPLKQKRDASAGYTRKQVLQTILHQRPLITAMILTAVIQVGN 250
BSNT_04638 180 FSIQPLLALYVNELHGPVNLAFFSGMAFSATGLGSLLLARKWGDLGDRYG 229
||:||||||||:||||..|||||||:|||||||||||.|||||.||||:|
BL02534___yux 251 FSVQPLLALYVSELHGTQNLAFFSGLAFSATGLGSLLAARKWGALGDRFG 300
BSNT_04638 230 HRRILIGLLLAASFFFIPQALASSLSVLLVFRFLFGMAMGGLLPCITAAI 279
|.:||:.|.|||:...|||.|.|....|:.||||||:|:||::|||||.|
BL02534___yux 301 HGKILMILALAAAVCVIPQGLTSQYETLVFFRFLFGIALGGMIPCITALI 350
BSNT_04638 280 RVQAPGSIQGEVLGYNVSFRFLGNVLGPLLGGIISSHFTISATFYVTAFL 329
||::||.||||||||||||||||||:||:||||:||.|.||:.||.||.|
BL02534___yux 351 RVESPGPIQGEVLGYNVSFRFLGNVIGPVLGGILSSFFGISSAFYATAVL 400
BSNT_04638 330 FFAGACMLWIMQKLRKDSYAKAS 352
||.|||:|...:..:|.|.||||
BL02534___yux 401 FFGGACLLMFQRSQQKKSEAKAS 423
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.