Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02245 and BL02521

See DNA alignment / Visit BSNT_02245 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02245.1.5803.seq
#    -bsequence pep-align/BL02521___ykoP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02245-BL02521___ykoP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02245-BL02521___ykoP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02245
# 2: BL02521___ykoP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity:     127/214 (59.3%)
# Similarity:   154/214 (72.0%)
# Gaps:          32/214 (15.0%)
# Score: 679.0
# 
#
#=======================================

BSNT_02245         1 MTVLLKKYGNYILRRTFTKYKGVFDHKEGEKMKTCFLSIWRVVDPIYFFF     50
                                                    |:.||||||.|:||.|:||
BL02521___yko      1 -------------------------------MRNCFLSIWSVIDPFYYFF     19

BSNT_02245        51 SRLTLVDKDRKSVFRVRLTKYKGHHVVLSDGTHIRKNDVLVKIHLHNIKL    100
                     |||||:|:.:.|:||||||||||..|||||||.|:|||||:|||||||||
BL02521___yko     20 SRLTLIDQTKTSIFRVRLTKYKGIDVVLSDGTVIKKNDVLIKIHLHNIKL     69

BSNT_02245       101 IRELQSIESAVRKGIIIYQKVYQSMPLLLDYINNHKKSEKIKGIVGITML    150
                     |:|||:|||||.:||:||||.|.|||:|.:||.||.:|::||||:|||.|
BL02521___yko     70 IKELQNIESAVGRGILIYQKAYFSMPILAEYIKNHHRSDQIKGIIGITTL    119

BSNT_02245       151 DKGVERLGFDVVTPVNPFYRCFKKITHIPIFYLTSKQVSLRRLPNTSYLF    200
                     .||||||||:.|.|.|.|||.|||:|.|||.|||:||.|||::|.:.|||
BL02521___yko    120 HKGVERLGFEAVEPANQFYRVFKKLTQIPILYLTTKQFSLRKIPPSQYLF    169

BSNT_02245       201 ISKEKLQKTYQKKD    214
                     ||||||.|:|.:| 
BL02521___yko    170 ISKEKLFKSYLQK-    182


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.