Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06232 and BL02502

See DNA alignment / Visit BSNT_06232 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:12
# Commandline: needle
#    -asequence pep-align/BSNT_06232___ppaC.1.5803.seq
#    -bsequence pep-align/BL02502___ppaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06232___ppaC-BL02502___ppaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06232___ppaC-BL02502___ppaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06232___ppaC
# 2: BL02502___ppaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     225/309 (72.8%)
# Similarity:   268/309 (86.7%)
# Gaps:           0/309 ( 0.0%)
# Score: 1163.0
# 
#
#=======================================

BSNT_06232___      1 MEKILIFGHQNPDTDTICSAIAYADLKNKLGFNAEPVRLGQVNGETQYAL     50
                     |.|:|||||:||||||||||||||:||.:||.:|||||||::||||:|||
BL02502___ppa      1 MSKVLIFGHKNPDTDTICSAIAYAELKKELGMDAEPVRLGEINGETEYAL     50

BSNT_06232___     51 DYFKQESPRLVETAANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRI    100
                     ..|..|.||||.|.|||.:.||||||||||||:.|:::|:||||||||||
BL02502___ppa     51 KKFNAEVPRLVNTVANETDSVILVDHNERQQSVDDLDQVRVLEVIDHHRI    100

BSNT_06232___    101 ANFETAEPLYYRAEPVGCTATILNKMYKENNVKIEKEIAGLMLSAIISDS    150
                     |||||::||||||||||||||||||:||||.|:|:|:|||||||||||||
BL02502___ppa    101 ANFETSDPLYYRAEPVGCTATILNKLYKENGVEIKKDIAGLMLSAIISDS    150

BSNT_06232___    151 LLFKSPTCTDQDVAAAKELAEIAGVNAEEYGLNMLKAGADLSKKTVEELI    200
                     |||||||||::||.||||||.||||:|:.|||:|||||||||.||:.:|:
BL02502___ppa    151 LLFKSPTCTEEDVKAAKELAAIAGVDADSYGLDMLKAGADLSAKTIPQLL    200

BSNT_06232___    201 SLDAKEFTLGSKKVEIAQVNTVDIEDVKKRQAELEAVISKVVAEKNLDLF    250
                     ||||||||:||.|||||||||||..||..|:.|::|.::|.|:||.||||
BL02502___ppa    201 SLDAKEFTMGSHKVEIAQVNTVDTNDVLSRKEEVDAELAKAVSEKGLDLF    250

BSNT_06232___    251 LLVITDILENDSLALAIGNEAAKVEKAFNVTLENNTALLKGVVSRKKQVV    300
                     :.|:||||.|||:.:|.|..|..|||||||||.:|||.||||||||||:|
BL02502___ppa    251 VFVVTDILTNDSVVVASGQAAQAVEKAFNVTLADNTATLKGVVSRKKQIV    300

BSNT_06232___    301 PVLTDAMAE    309
                     |.||:|:..
BL02502___ppa    301 PPLTEALKG    309


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.