Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05475 and BL02439

See DNA alignment / Visit BSNT_05475 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:37
# Commandline: needle
#    -asequence pep-align/BSNT_05475___rbsK.1.5803.seq
#    -bsequence pep-align/BL02439___rbsK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05475___rbsK-BL02439___rbsK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05475___rbsK-BL02439___rbsK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05475___rbsK
# 2: BL02439___rbsK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     206/293 (70.3%)
# Similarity:   236/293 (80.5%)
# Gaps:          11/293 ( 3.8%)
# Score: 1057.0
# 
#
#=======================================

BSNT_05475___      1 -----------MDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAAR     39
                                |||||||.|||.|||||||.||:||||||||||||||||
BL02439___rbs      1 MSKICVIGSSSMDLVVTSPKRPAAGETVLGESFKTVPGGKGANQAVAAAR     50

BSNT_05475___     40 LGAQVFMVGKVGDDHYGTAILNNLKANGVCTDYMEPVTHTESGTAHIVLA     89
                     |||:|.|:|.|||||||.|||:|.:||||.|||:||||..||||||||||
BL02439___rbs     51 LGAEVHMIGCVGDDHYGKAILDNFQANGVLTDYVEPVTGQESGTAHIVLA    100

BSNT_05475___     90 EGDNSIVVVKGANDDITPAYALKALEQIEKVDMVLIQQEIPEETVDEVCK    139
                     :|||||:|||||||.:||.|..|||..|::.|:|||||||||||||.|..
BL02439___rbs    101 DGDNSIIVVKGANDHVTPEYVQKALPAIKQADIVLIQQEIPEETVDYVSG    150

BSNT_05475___    140 YCHSLDIPIMLNPAPARPLKQETIDHATYLTPNEHESSILFPDLTTSEAL    189
                     .|.||.||::|||||||||:.||::||.|:||||||:|:||..::..|||
BL02439___rbs    151 LCSSLGIPLLLNPAPARPLRPETVEHAAYITPNEHEASVLFQGMSREEAL    200

BSNT_05475___    190 ALYPAKLFITEGKQGVRYSAGSKEVLIPSFPVEPVDTTGAGDTFNAAFAV    239
                     ..||.||||||||.||||..|.:|.::|||||..:|||||||||||.|||
BL02439___rbs    201 KRYPEKLFITEGKNGVRYHNGLEERVVPSFPVNAIDTTGAGDTFNAGFAV    250

BSNT_05475___    240 ALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNEVEELLS    282
                     ||:||:.||:|||||||||||||..||||||||.|:|||..||
BL02439___rbs    251 ALSEGQSIESALRFANRAASLSVLKFGAQGGMPKRDEVERELS    293


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