Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05440 and BL02431

See DNA alignment / Visit BSNT_05440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05440___gtaB.1.5803.seq
#    -bsequence pep-align/BL02431___gtaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05440___gtaB-BL02431___gtaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05440___gtaB-BL02431___gtaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05440___gtaB
# 2: BL02431___gtaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     286/292 (97.9%)
# Similarity:   288/292 (98.6%)
# Gaps:           0/292 ( 0.0%)
# Score: 1466.0
# 
#
#=======================================

BSNT_05440___      1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAVEAGI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02431___gta      1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAVEAGI     50

BSNT_05440___     51 EDIIIVTGKSKRAIEDHFDFSPELERNLEEKGKTELLEKVKKASNLADIH    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BL02431___gta     51 EDIIIVTGKSKRAIEDHFDFSPELERNLEEKGKIELLEKVKKASNLADIH    100

BSNT_05440___    101 YIRQKEPKGLGHAVWCARNFIGDEPFAVLLGDDIVQGEKPGLRQLMDEYE    150
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BL02431___gta    101 YIRQKEPKGLGHAVWCARNFIGDEPFAVLLGDDIVQAEKPGLRQLMDEYE    150

BSNT_05440___    151 KTLSSVIGVQQVPEDQTHRYGIIDPLTNEGRLYQVKNFVEKPKPGTAPSN    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02431___gta    151 KTLSSVIGVQQVPEDQTHRYGIIDPLTNEGRLYQVKNFVEKPKPGTAPSN    200

BSNT_05440___    201 LAILGRYVFTPEIFMYLDKQQIGAGGEIQLTDAIQQLNEIQRVFAYDFEG    250
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
BL02431___gta    201 LAILGRYVFTPEIFMYLDKQQIGAGGEIQLTDAIQKLNEIQRVFAYDFEG    250

BSNT_05440___    251 KRYDVGEKLGFIQTTLEFAMQDSELKDSLIPFMQDLLSKEEF    292
                     ||||||||||||||||||||||.||||||||||||||:|||.
BL02431___gta    251 KRYDVGEKLGFIQTTLEFAMQDDELKDSLIPFMQDLLAKEEV    292


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.