Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03883 and BL02429
See
DNA alignment /
Visit
BSNT_03883 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence pep-align/BSNT_03883___cypA.1.5803.seq
# -bsequence pep-align/BL02429___cypA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03883___cypA-BL02429___cypA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03883___cypA-BL02429___cypA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03883___cypA
# 2: BL02429___cypA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 309/411 (75.2%)
# Similarity: 360/411 (87.6%)
# Gaps: 1/411 ( 0.2%)
# Score: 1596.0
#
#
#=======================================
BSNT_03883___ 1 MSSKEKNSVTILTESQLSSRAFKDEAYEFYKELRKSQPLYPLSLGALGKG 50
||||::.|..||||.:|||.|||||||||||.||.|:|:.|:|:|.||:|
BL02429___cyp 1 MSSKQEESFAILTERELSSAAFKDEAYEFYKRLRASRPVCPVSMGELGEG 50
BSNT_03883___ 51 WLISRYEDAIHLLKNEKLKKNYENVFTAKE-KRPALLKNEESLTKHMLNS 99
|||:||:||:|:||:.::||||||.||.:| :..:.|:|||.|:|||||:
BL02429___cyp 51 WLITRYDDAVHILKDARVKKNYENAFTEEELENFSALENEEPLSKHMLNA 100
BSNT_03883___ 100 DPPDHNRLRTLVQKAFTHRMIFQLEDKIQHIADSLLDKVQPNKFMNLVDD 149
|||||.|||:|||||||.||:.|||::||.|||||||:|:||..||||||
BL02429___cyp 101 DPPDHGRLRSLVQKAFTPRMVLQLENRIQKIADSLLDQVEPNHSMNLVDD 150
BSNT_03883___ 150 YAFPLPIIVISEMLGIPLEDRQKFRVWSQAIIDFSDAPERLQENDHLLGE 199
:|||||||||||||||||||||||||||||:|||||.||.|:|..:.:||
BL02429___cyp 151 FAFPLPIIVISEMLGIPLEDRQKFRVWSQAVIDFSDTPESLEEYKYKIGE 200
BSNT_03883___ 200 FVEYLESLVRKKRSEPSGDLISALIQAESEGTQLSTEELYSMIMLLIVIG 249
|.||||.||||||.||:.||:|||||||||||:||.||||:.||||||.|
BL02429___cyp 201 FAEYLEYLVRKKRDEPAEDLVSALIQAESEGTKLSIEELYATIMLLIVAG 250
BSNT_03883___ 250 HETTVNLITNMTYALMCHGDQLEKLRQQPDLMNSAIEEALWFHSPVELTT 299
||||||||||||.||:.|.:|||||||..||::|||||||.|:|||||||
BL02429___cyp 251 HETTVNLITNMTLALLNHPEQLEKLRQNADLIDSAIEEALRFYSPVELTT 300
BSNT_03883___ 300 IRWTAEPFMLHGQEIKRKDVIIISLASANRDEKIFPNADIFDIERKNNRH 349
:||.||||.|||||||||||:||||||||||..:|.|||.||||||:|||
BL02429___cyp 301 LRWAAEPFTLHGQEIKRKDVVIISLASANRDYMVFSNADRFDIERKDNRH 350
BSNT_03883___ 350 IAFGHGNHFCLGAQLARLEAKIAISTLLRRCPNIQLKGEKEQIKWKGNFL 399
:|||||:||||||.||||||||||.|||||..:|::|||:||||||||||
BL02429___cyp 351 LAFGHGSHFCLGAPLARLEAKIAIQTLLRRFEHIEIKGEREQIKWKGNFL 400
BSNT_03883___ 400 MRALEELPLSF 410
|||||||||||
BL02429___cyp 401 MRALEELPLSF 411
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.