Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04128 and BL02384
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence pep-align/BSNT_04128.1.5803.seq
# -bsequence pep-align/BL02384___hsdM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04128-BL02384___hsdM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04128-BL02384___hsdM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04128
# 2: BL02384___hsdM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 559
# Identity: 133/559 (23.8%)
# Similarity: 229/559 (41.0%)
# Gaps: 133/559 (23.8%)
# Score: 368.0
#
#
#=======================================
BSNT_04128 1 ----MNNQEIVQKLWNLCNVLRD--DGITYQQYVTELTYLLFLKMMKEQE 44
:...:|...||...:..|. |..||:.|:..:.::.:|....::.
BL02384___hsd 1 MSEKVTKDQINSVLWQAADTFRGKVDSSTYKDYILTMLFIKYLSDAYKEH 50
BSNT_04128 45 TEG---------------------VIPEGYRWDDLLDKEG-LELKTFYQR 72
.|. |:.|...:|.|..|.. .|:.....:
BL02384___hsd 51 LEEYTKRYNGDEQRIQRALSRERFVLDEQSTFDYLYSKRNDAEIGEIINK 100
BSNT_04128 73 LLLELGSSENERLRLIY------SDASTSIAEPKNLEKIIKSIDALDWYN 116
.|..|.:....:||.:: |:|....|:.:| .:::|: |:.:|
BL02384___hsd 101 ALERLENENTGKLRGVFRNIDFNSEAILGKAKERN--AMLRSL--LEDFN 146
BSNT_04128 117 ---------AKEEGLGNLYEGLLEKNASEKKSGAGQYFTPRVLIDVMVQL 157
..|:.:|:.|:.::|:.||:.....|:::||.:..:::.:|
BL02384___hsd 147 KLTLKPSVVGSEDVIGDAYQYMIERFASDAGKKGGEFYTPSMASELLARL 196
BSNT_04128 158 IDPKIGERCADPAAGTFGFMIAADQYLKNQTDDYFDIEPQEAEFQKKEAF 207
:.|:..:|..||..|:...:|.....:.| ||.|.
BL02384___hsd 197 VKPQENDRVYDPTCGSGSLLIRVANQVPN----------------KKVAI 230
BSNT_04128 208 VGMELVKDTHRLALMNALLHNI-EGRLEQGDTLSG-----NGKWMKNFDV 251
.|.|....||.|||||..||.| :.::|.||||:. :||.|| |..
BL02384___hsd 231 YGQERNGATHSLALMNMYLHGIDDAKIEWGDTLANPLHLEDGKLMK-FQA 279
BSNT_04128 252 ILTNPPFGTKK-----GGERVSRDDLTFE---------------TSNKQL 281
|:.||||...| .||..:......| :|....
BL02384___hsd 280 IVANPPFSLDKWAMGFAGEGTNDSKFKMEASLDPHRRFEWGVPPSSKGDY 329
BSNT_04128 282 NFLQLIYNALKDDGNARAAVILPDNVLFESGIGSQIRRDLMNKCNLHTIL 331
.|:|.:..:|.::| |.|.|||..|||......:||:.::....|..::
BL02384___hsd 330 AFVQHMLYSLAENG--RMATILPHGVLFRGASEGKIRQQIIEMNLLDAVI 377
BSNT_04128 332 RLPTGIFYAQGVKTNVLFFTRGTTDQDNTKDVWVYDLRT--NMTSFGKRN 379
.||.|:||..|:...:|.|.:..| .|||...|... |......:|
BL02384___hsd 378 GLPEGLFYGTGIPACILVFKKNRT----RKDVLFIDASAEGNYEKGKNQN 423
BSNT_04128 380 QLTMAHFEHFMKAYVAEDRSKVED-----ERWNKFS----REEIAKKDDS 420
||. .:|.:|:.| |..:|:| .:||.:.|.:
BL02384___hsd 424 QLR------------EQDIAKIVDTYEKRETIDKYSYVATLDEIKENDYN 461
BSNT_04128 421 LDIGLIADESLSSYENLPDPIESAEEAIAKLQQAMELLNEVVEELRAVEE 470
|:|....| :..|..|..:.:.:|.||.::|.: :|:.| |.
BL02384___hsd 462 LNIPRYVD---TFEEEEPVDMHAVKENIANIKQEL-------QEVEA-EM 500
BSNT_04128 471 DEVVKK--- 476
::.:|:
BL02384___hsd 501 EKYLKELGL 509
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