Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06198 and BL02373

See DNA alignment / Visit BSNT_06198 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence pep-align/BSNT_06198___yycH.1.5803.seq
#    -bsequence pep-align/BL02373___yycH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06198___yycH-BL02373___yycH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06198___yycH-BL02373___yycH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06198___yycH
# 2: BL02373___yycH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 458
# Identity:     236/458 (51.5%)
# Similarity:   326/458 (71.2%)
# Gaps:           7/458 ( 1.5%)
# Score: 1262.5
# 
#
#=======================================

BSNT_06198___      1 MKRENIKTILLTVLVVISLVFTWGIWTFQPNFSEGSSSTESTVREKHKIE     50
                     ||||.||||:|::||:|||:||:.||.||.|: |....:::.|.:|..|.
BL02373___yyc      1 MKRETIKTIILSLLVLISLLFTFNIWGFQGNY-EKVEDSQAQVSDKQPIT     49

BSNT_06198___     51 KTTQKLSETVRPRDMFIHDDGAHYKVDDNALYEEIWSDLPHWDVKGIKDI    100
                     ..|:.|:|.|:|:.||||::|.||.::|..||.::|.|:..|:||.:|||
BL02373___yyc     50 NQTKLLNEAVKPQQMFIHENGQHYLLNDTTLYSQLWDDMGRWEVKSLKDI     99

BSNT_06198___    101 SDQYDKAGFKSWFYGIGGSEAKLDLQFSDTIPIDIFQTLFKWSNQSFEYS    150
                     ||::|:..||:|.|. ...::||||.|||.||||:.|.|||||..|:||:
BL02373___yyc    100 SDKFDRQQFKNWLYA-KNKDSKLDLVFSDNIPIDVLQPLFKWSANSYEYN    148

BSNT_06198___    151 SFDHILIPFNETKANKKIYLVSYSKQLILEVTVESANYRNIMNDLKNRQS    200
                     |||.|::||||.:..||||.||:||:.::|..:||||||||::|::..:|
BL02373___yyc    149 SFDRIVLPFNEGRGMKKIYFVSFSKETVVEAVIESANYRNILSDIEKEKS    198

BSNT_06198___    201 NMPAFSLFSIGSKKEFLLPNKPLTMDKKEFVTESIKTNTFKQALFSDPSI    250
                     .||.:..|:|.|:::.|||...|.:.:||:.||:|....||:|||.||..
BL02373___yyc    199 QMPLYEDFAINSRRDVLLPVNRLKLSEKEYFTETISPTRFKKALFDDPQT    248

BSNT_06198___    251 VREDSNYNNRNVLTDGISRLDVNLSQRQVQFQQRNLVQSTSYQTGELIKK    300
                     ||:::|. ||.|.|||.|.|::..:.||::||.|||..|||||.||||.|
BL02373___yyc    249 VRQETNL-NRPVYTDGTSLLEIYSNNRQIKFQHRNLEPSTSYQNGELINK    297

BSNT_06198___    301 SQKYLEDTGSWTDHYQFFNINDSQQLSFYIFMDQIPVINSTAKPFGATSA    350
                     |.|||.|||||||.||||.:|::||::|.:||||:||:||..:|||.|| 
BL02373___yyc    298 SFKYLNDTGSWTDDYQFFGLNENQQINFNLFMDQLPVVNSQNQPFGTTS-    346

BSNT_06198___    351 ITVQWANDDILSYKRPNYSLG--TNPIKTSETELMSGSEVRMLLSKQTAY    398
                     |.::|||:|||.||.|.|.||  .||:...:.|:|||.|:...|.....|
BL02373___yyc    347 IELRWANNDILDYKHPTYVLGANANPVSKKDKEIMSGEELIQFLQDNEEY    396

BSNT_06198___    399 DTDKIDQIFLAYQLVSTSTNDDPLVELEPVWAMKVNGKIVPIT-KDLLRK    447
                     |.|||:|||.||::||.|...||||:|.|.|.:|:||.:.|:: ||...|
BL02373___yyc    397 DFDKIEQIFPAYEMVSVSEEQDPLVKLVPTWCIKINGTVKPVSKKDSAVK    446

BSNT_06198___    448 EGANSGVE    455
                     ||..:|||
BL02373___yyc    447 EGIENGVE    454


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