Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02590 and BL02302
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence pep-align/BSNT_02590___prkC.1.5803.seq
# -bsequence pep-align/BL02302___prkC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02590___prkC-BL02302___prkC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02590___prkC-BL02302___prkC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02590___prkC
# 2: BL02302___prkC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 475/657 (72.3%)
# Similarity: 556/657 (84.6%)
# Gaps: 9/657 ( 1.4%)
# Score: 2478.5
#
#
#=======================================
BSNT_02590___ 1 MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDN 50
||||:||||||:|||.||||||||||||.|||||||||||:||||:.:|.
BL02302___prk 1 MLIGRRISGRYEILRAIGGGGMANVYLALDIILDREVAIKVLRFDFVHDA 50
BSNT_02590___ 51 EFIRRFRREAQSASSLDHPNIVSIYDLGEEDDIYYIVMEYVEGMTLKEYI 100
:||||||||||||:||||||||||||:|||||||||||||||||||||||
BL02302___prk 51 DFIRRFRREAQSAASLDHPNIVSIYDVGEEDDIYYIVMEYVEGMTLKEYI 100
BSNT_02590___ 101 TANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKV 150
...||||||||:.|||||||||||||.|||||||||||||||||||:|||
BL02302___prk 101 NRTGPLHPKEAVQIMEQIVSAIAHAHDNQIVHRDIKPHNILIDHMGHIKV 150
BSNT_02590___ 151 TDFGIATALSSTTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVL 200
||||||.|||||||||||||||||||||||||||||:|||||||:|||||
BL02302___prk 151 TDFGIAMALSSTTITHTNSVLGSVHYLSPEQARGGLSTKKSDIYSLGIVL 200
BSNT_02590___ 201 FELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQSVENIILKATA 250
|||||.|:||:|||||||||||||:||||.|||||:||||:||::|||.|
BL02302___prk 201 FELLTARMPFEGESAVSIALKHLQSETPSVKRWNPAVPQSIENVVLKAMA 250
BSNT_02590___ 251 KDPFHRYETAEDMEADIKTAFDADRLNEKRFTIQEDEEMTKAIPIIKD-- 298
||||||||.||:||.|:|||||.||||||||||..|:|||||:||||:
BL02302___prk 251 KDPFHRYEAAEEMENDLKTAFDPDRLNEKRFTIPSDDEMTKAVPIIKNLP 300
BSNT_02590___ 299 ---EELAKAAGEKEAEVTTAQEN----KTKKNGKRKKWPWVLLTICLVFI 341
.......||:||...:.:|. |..|..||||||.:|||:..|..
BL02302___prk 301 ENGSSSQSGGGEEEAAPLSKKEKKKQAKANKKKKRKKWPLILLTVFFVLA 350
BSNT_02590___ 342 TAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGLLEKEGLQVDSELLEI 391
.:.:||:|||||||:||||.:|||:|:|||:|...||.||.:||....:|
BL02302___prk 351 ASAVLALTVFPSLFIPKDVAVPDVAGLEYEEAVIKLEDEGFEVDPNAEDI 400
BSNT_02590___ 392 SDEKIEEGLMVKTDPKADTTVKEGATVTLYKSTGKAKTEIGDVTGQTVDQ 441
:|:||||||:|||||.|...||||:||.||||:||.|||:.||.||.||.
BL02302___prk 401 ADDKIEEGLIVKTDPAAGDIVKEGSTVKLYKSSGKEKTEVDDVVGQKVDA 450
BSNT_02590___ 442 AKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELVPSEDQVKLTVS 491
|||.|:.:|||::...||:||:.|||:|:|:|:||||:|.::|:||||||
BL02302___prk 451 AKKLLEQKGFKNIKTEEVHDEEEAGTIIEQDPAAGTEIVAADDEVKLTVS 500
BSNT_02590___ 492 IGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKP 541
:|||.|||||||||||:||||||:|:.|.||||||:|:|||||||:||||
BL02302___prk 501 LGPEAITLRDLKTYSKQAASGYLDDHQLVLVEKEAHSEDVPEGQVIKQKP 550
BSNT_02590___ 542 AAGTAVKPGNEVEVTFSLGPEKKPAKTVKEKVKIPYEPENEGDELQVQIA 591
.||.:||||::|||||||||::||.|||.||:.|||||...|:|..|||:
BL02302___prk 551 EAGASVKPGDKVEVTFSLGPKQKPVKTVTEKIDIPYEPGAAGEEQNVQIS 600
BSNT_02590___ 592 VDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYKT 641
:||.:|||||.||.|||..|.||||:.:|.|||||||||.:|:|||..||
BL02302___prk 601 IDDEEHSISDVYENFKITAPAERTIKFRIAPGQKGYYQVTINDKVVRSKT 650
BSNT_02590___ 642 IEYPKDE 648
||||:||
BL02302___prk 651 IEYPEDE 657
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