Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02532 and BL02256

See DNA alignment / Visit BSNT_02532 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_02532___sigG.1.5803.seq
#    -bsequence pep-align/BL02256___sigG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02532___sigG-BL02256___sigG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02532___sigG-BL02256___sigG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02532___sigG
# 2: BL02256___sigG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     223/260 (85.8%)
# Similarity:   231/260 (88.8%)
# Gaps:          24/260 ( 9.2%)
# Score: 1132.0
# 
#
#=======================================

BSNT_02532___      1 -----------------------MGKLFRQLQDEGDDSAREKLVNGNLRL     27
                                            |.|||:|:|||||.:||||||||||||
BL02256___sig      1 MSRNKVEICGVDTSKLPVLKNEEMRKLFKQMQDEGDTTAREKLVNGNLRL     50

BSNT_02532___     28 VLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLSHNVKFSTYAVPMII     77
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02256___sig     51 VLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLSHNVKFSTYAVPMII    100

BSNT_02532___     78 GEIRRYLRDNNPIRVSRSLRDIAYKALQVRERLISETSKEPTAEDIAKVL    127
                     ||||||||||||||||||||||||||||||||||||||:||||::|||.|
BL02256___sig    101 GEIRRYLRDNNPIRVSRSLRDIAYKALQVRERLISETSREPTAQEIAKEL    150

BSNT_02532___    128 EVPHEEIVFALDAIQDPVSLFEPIYNDGGDPIYVMDQISDERNTDSQWIE    177
                     ||.||||||||||||||||||||||||||||||||||||||||.||||||
BL02256___sig    151 EVSHEEIVFALDAIQDPVSLFEPIYNDGGDPIYVMDQISDERNKDSQWIE    200

BSNT_02532___    178 ELALKEGMRRLNDREKMILRKRFFQGKTQMEVAEEIGISQAQVSRLEKAA    227
                     ||||||||||||:||||||||||||||||||||:||||||||||||||||
BL02256___sig    201 ELALKEGMRRLNEREKMILRKRFFQGKTQMEVADEIGISQAQVSRLEKAA    250

BSNT_02532___    228 IKQMNKNIHQ    237
                     ||||||||| 
BL02256___sig    251 IKQMNKNIH-    259


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