Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02506 and BL02235

See DNA alignment / Visit BSNT_02506 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02506___ftsL.1.5803.seq
#    -bsequence pep-align/BL02235___ftsL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02506___ftsL-BL02235___ftsL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02506___ftsL-BL02235___ftsL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02506___ftsL
# 2: BL02235___ftsL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      76/117 (65.0%)
# Similarity:    96/117 (82.1%)
# Gaps:           0/117 ( 0.0%)
# Score: 379.0
# 
#
#=======================================

BSNT_02506___      1 MSNLAYQPEKQQRHAISPEKKVIVKKRASITLGEKVLLVLFAAAVLSVSL     50
                     ||||||:.|||||...|.|:.||:::|||||||||||:||||.||||.||
BL02235___fts      1 MSNLAYKVEKQQRQTDSAEQSVIIRRRASITLGEKVLIVLFALAVLSASL     50

BSNT_02506___     51 LIVSKAYAAYQTNIEVQKLEEQISSENKQIGDLEKSVADLSKPQRIMDIA    100
                     .::|||:||||||||:||||:::.:|:.::.||||....|.:|.||||||
BL02235___fts     51 FMISKAFAAYQTNIEIQKLEKKVETESSRVDDLEKEADMLKEPDRIMDIA    100

BSNT_02506___    101 KKNGLNLKDKKVKNIQE    117
                     :|.||.|.|||||:|||
BL02235___fts    101 RKKGLKLGDKKVKDIQE    117


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.